Index by Author

January 2025; 35 (1)
  1. A
  2. B
  3. C
  4. D
  5. E
  6. F
  7. G
  8. H
  9. I
  10. J
  11. K
  12. L
  13. M
  14. N
  15. O
  16. P
  17. Q
  18. R
  19. S
  20. T
  21. U
  22. V
  23. W
  24. X
  25. Y
  26. Z

A

  1. Adams, Levi

    • Inferring disease progression stages in single-cell transcriptomics using a weakly supervised deep learning approach Genome Res. January 2025 35: 135-146; Published in Advance December 2, 2024, doi:10.1101/gr.278812.123
      OPEN ACCESS ARTICLE

  2. Aparicio, Ana

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

B

  1. Babadoudou, Jordan

    • Inferring disease progression stages in single-cell transcriptomics using a weakly supervised deep learning approach Genome Res. January 2025 35: 135-146; Published in Advance December 2, 2024, doi:10.1101/gr.278812.123
      OPEN ACCESS ARTICLE

  2. Bai, Jinyue

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Bellott, Daniel W.

    • Post-transcriptional cross- and auto-regulation buffer expression of the human RNA helicases DDX3X and DDX3Y Genome Res. January 2025 35: 20-30; Published in Advance January 10, 2025, doi:10.1101/gr.279707.124
      OPEN ACCESS ARTICLE

  4. Bishop, John D.D.

  5. Butter, Falk

C

  1. Cao, Li-Jun

  2. Chan, K.C. Allen

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Chan, Ming Lok

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  4. Chebib, Jobran

  5. Chen, Jin-Cui

  6. Chen, Mu-En

  7. Chen, Rui

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  8. Chen, Yujie

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  9. Cheng, Suk Hang

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  10. Cheng, Xuesen

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  11. Cheow, Lih Feng

    • Single-nucleus CUT&RUN elucidates the function of intrinsic and genomics-driven epigenetic heterogeneity in head and neck cancer progression Genome Res. January 2025 35: 162-177; Published in Advance December 2, 2024, doi:10.1101/gr.279105.124
      OPEN ACCESS ARTICLE

  12. Cheung, Peter P.H.

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  13. Choy, L.Y. Lois

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

D

  1. DasGupta, Ramanuj

    • Single-nucleus CUT&RUN elucidates the function of intrinsic and genomics-driven epigenetic heterogeneity in head and neck cancer progression Genome Res. January 2025 35: 162-177; Published in Advance December 2, 2024, doi:10.1101/gr.279105.124
      OPEN ACCESS ARTICLE

  2. DeAngelis, Margaret M.

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  3. Derks, Jason

    • Post-transcriptional cross- and auto-regulation buffer expression of the human RNA helicases DDX3X and DDX3Y Genome Res. January 2025 35: 20-30; Published in Advance January 10, 2025, doi:10.1101/gr.279707.124
      OPEN ACCESS ARTICLE

  4. Ding, Spencer C.

    • Artificial intelligence and machine learning in cell-free-DNA-based diagnostics Genome Res. January 2025 35: 1-19; doi:10.1101/gr.278413.123
      OPEN ACCESS ARTICLE

  5. Doughty, Benjamin

E

  1. Emmerich, Christiane

F

  1. Feng, Zhanying

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

G

  1. Gai, Wanxia

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  2. Gao, Zhuoran

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Greenleaf, William J.

  4. Guan, Qing

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  5. Guo, Shuai

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

H

  1. Han, Ge

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  2. Hao, Dingjun

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  3. Häußermann, Lilia

  4. Hemauer, Christopher

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  5. Herbst, Allen

    • Chimeric mitochondrial RNA transcripts predict mitochondrial genome deletion mutations in mitochondrial genetic diseases and aging Genome Res. January 2025 35: 55-65; Published in Advance November 27, 2024, doi:10.1101/gr.279072.124

  6. Holland, Peter W.H.

  7. Hou, Yiran

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

J

  1. Ji, Shuangxi

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  2. Jia, Shuaijun

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  3. Jiang, Peiyong

    • Artificial intelligence and machine learning in cell-free-DNA-based diagnostics Genome Res. January 2025 35: 1-19; doi:10.1101/gr.278413.123
      OPEN ACCESS ARTICLE
    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  4. Jiang, Yujie

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  5. Jonas, Anika

K

  1. Kang, Guannan

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  2. Kang, Junsu

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  3. Keightley, Peter D.

  4. Kim, Ivana K.

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  5. Kim, Samuel H.

  6. Kim, Yoon-Seong

    • Inferring disease progression stages in single-cell transcriptomics using a weakly supervised deep learning approach Genome Res. January 2025 35: 135-146; Published in Advance December 2, 2024, doi:10.1101/gr.278812.123
      OPEN ACCESS ARTICLE

  7. Kopetz, Scott

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  8. Koval, Andrew

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  9. Kundaje, Anshul

  10. Künzel, Sven

L

  1. Lam, W.K. Jacky

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  2. Lee, Chui Ting

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Lee, Sanghoon

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  4. Lewin, Thomas D.

  5. Li, Chunyi

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  6. Li, Han

  7. Li, Wenshuo

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  8. Li, Yumei

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  9. Li, Zihe

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  10. Liang, Qingnan

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  11. Liao, Isabel Jiah-Yih

  12. Liu, Xiaoqian

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  13. Lo, Y.M. Dennis

    • Artificial intelligence and machine learning in cell-free-DNA-based diagnostics Genome Res. January 2025 35: 1-19; doi:10.1101/gr.278413.123
      OPEN ACCESS ARTICLE
    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  14. López-Cortegano, Eugenio

  15. Luo, Yi-Jyun

M

  1. Ma, Jinrui

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  2. Ma, Mary-Jane L.

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Ma, Zhong-Zheng

  4. Malki, Yasine

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  5. Marinov, Georgi K.

  6. Muliaditan, Daniel

    • Single-nucleus CUT&RUN elucidates the function of intrinsic and genomics-driven epigenetic heterogeneity in head and neck cancer progression Genome Res. January 2025 35: 162-177; Published in Advance December 2, 2024, doi:10.1101/gr.279105.124
      OPEN ACCESS ARTICLE

N

  1. Nguyen, Petr

  2. Nischwitz, Emily

  3. Nowacki, Mariusz

O

  1. Owen, Leah A.

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

P

  1. Page, David C.

    • Post-transcriptional cross- and auto-regulation buffer expression of the human RNA helicases DDX3X and DDX3Y Genome Res. January 2025 35: 20-30; Published in Advance January 10, 2025, doi:10.1101/gr.279707.124
      OPEN ACCESS ARTICLE

  2. Peng, Wenlei

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

Q

  1. Qin, Tao

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  2. Qiu, Qiang

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

R

  1. Rengarajan, Shruthi

    • Post-transcriptional cross- and auto-regulation buffer expression of the human RNA helicases DDX3X and DDX3Y Genome Res. January 2025 35: 20-30; Published in Advance January 10, 2025, doi:10.1101/gr.279707.124
      OPEN ACCESS ARTICLE

S

  1. Seah, Brandon K.B.

  2. Shang, Huimin

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Shang, Meiru

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  4. Shen, John Paul

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  5. Shin, Kwangdeok

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  6. Singh, Aditi

  7. Slavov, Nikolai

    • Post-transcriptional cross- and auto-regulation buffer expression of the human RNA helicases DDX3X and DDX3Y Genome Res. January 2025 35: 20-30; Published in Advance January 10, 2025, doi:10.1101/gr.279707.124
      OPEN ACCESS ARTICLE

  8. Snyder, Michael P.

  9. Song, Wei

  10. Sood, Anil K.

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  11. Stothard, Paul

    • Chimeric mitochondrial RNA transcripts predict mitochondrial genome deletion mutations in mitochondrial genetic diseases and aging Genome Res. January 2025 35: 55-65; Published in Advance November 27, 2024, doi:10.1101/gr.279072.124

  12. Swart, Estienne C.

T

  1. Tanaka, Yoshiaki

    • Inferring disease progression stages in single-cell transcriptomics using a weakly supervised deep learning approach Genome Res. January 2025 35: 135-146; Published in Advance December 2, 2024, doi:10.1101/gr.278812.123
      OPEN ACCESS ARTICLE

  2. Tautz, Diethard

  3. Tse, Irene O.L.

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  4. Tsui, W.H. Adrian

    • Artificial intelligence and machine learning in cell-free-DNA-based diagnostics Genome Res. January 2025 35: 1-19; doi:10.1101/gr.278413.123
      OPEN ACCESS ARTICLE

V

  1. Vandiver, Amy R.

    • Chimeric mitochondrial RNA transcripts predict mitochondrial genome deletion mutations in mitochondrial genetic diseases and aging Genome Res. January 2025 35: 55-65; Published in Advance November 27, 2024, doi:10.1101/gr.279072.124

  2. Vock, Anastasia

W

  1. Wanagat, Jonathan

    • Chimeric mitochondrial RNA transcripts predict mitochondrial genome deletion mutations in mitochondrial genetic diseases and aging Genome Res. January 2025 35: 55-65; Published in Advance November 27, 2024, doi:10.1101/gr.279072.124

  2. Wang, Irene

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  3. Wang, Ting

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  4. Wang, Wen

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  5. Wang, Wenyi

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  6. Wang, Yong

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  7. Wehbe, Fabien

    • Inferring disease progression stages in single-cell transcriptomics using a weakly supervised deep learning approach Genome Res. January 2025 35: 135-146; Published in Advance December 2, 2024, doi:10.1101/gr.278812.123
      OPEN ACCESS ARTICLE

  8. Wei, Shu-Jun

  9. Weinstein, John N.

    • A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples Genome Res. January 2025 35: 147-161; Published in Advance November 25, 2024, doi:10.1101/gr.278822.123
      OPEN ACCESS ARTICLE

  10. Womersley, Howard J.

    • Single-nucleus CUT&RUN elucidates the function of intrinsic and genomics-driven epigenetic heterogeneity in head and neck cancer progression Genome Res. January 2025 35: 162-177; Published in Advance December 2, 2024, doi:10.1101/gr.279105.124
      OPEN ACCESS ARTICLE

  11. Wong, Winsome W.S.

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

X

  1. Xing, Xiaoyun

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  2. Xu, Xinzhou

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  3. Xu, Ziyu

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

Y

  1. Yang, Fangyuan

  2. Yue, Huishan

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  3. Yuen, Samantha

    • Inferring disease progression stages in single-cell transcriptomics using a weakly supervised deep learning approach Genome Res. January 2025 35: 135-146; Published in Advance December 2, 2024, doi:10.1101/gr.278812.123
      OPEN ACCESS ARTICLE

Z

  1. Zeng, Jianyang

  2. Zeng, Qinglin

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  3. Zhang, Guokun

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  4. Zhang, Sai

  5. Zhang, Yiqiong

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  6. Zhao, Guoyan

    • Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution Genome Res. January 2025 35: 202-218; Published in Advance January 14, 2025, doi:10.1101/gr.279372.124
      OPEN ACCESS ARTICLE

  7. Zhou, Botong

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

  8. Zhou, Qing

    • Analysis of a cell-free DNA–based cancer screening cohort links fragmentomic profiles, nuclease levels, and plasma DNA concentrations Genome Res. January 2025 35: 31-42; Published in Advance November 27, 2024, doi:10.1101/gr.279667.124
      OPEN ACCESS ARTICLE

  9. Zhu, Lei

    • High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration Genome Res. January 2025 35: 188-201; Published in Advance November 14, 2024, doi:10.1101/gr.279448.124
      OPEN ACCESS ARTICLE

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