Your search for returned 6,443 results
Method
Single-cell transcriptome analysis reveals onco-fetal reprogramming with implications for drug resistance and clinical outcome
- First Published October 9, 2026
Method
Protein large language model–assisted one-to-one gene homology mapping in cross-species single-cell transcriptome integration
- First Published October 9, 2026
Research
Temporal transcriptomics identifies transregulation by multiple lncRNAs in human iPSCs
- First Published October 9, 2026
Research
Error correction algorithms for efficient gene expression quantification in single cell transcriptomics with Arcane
- First Published October 7, 2026
Research
Shared transcriptional consequences of epigenetic machinery disruption in murine neuronal progenitors
- First Published October 7, 2026
Research
Meso-scale spatial analysis of papilloma formation and clonal expansion in cancerized skin
- First Published October 1, 2026
Method
Fast and accurate construction of multiple sequence alignments from protein language embeddings with ARIES
- First Published October 1, 2026
Method
Optical genome mapping identifies clinically relevant somatic structural variation in epilepsy-affected brain tissue
- First Published October 1, 2026
Method
Scaling coalescent-based species tree inference to 100,000 taxa with STELAR-X
- First Published October 1, 2026
Corrigendum
Corrigendum: Profiling the long noncoding RNA interaction network in the regulatory elements of target genes by chromatin in situ reverse transcription sequencing
- First Published October 1, 2026
Research
Dissecting functional regulatory convergence over 160 million years of therian evolution
- First Published September 23, 2026
Method
Viral haplotype reconstruction from long reads with virCHap
- First Published September 23, 2026
Method
Multilevel ensemble for genome-wide prediction of cell-specific G-quadruplexes utilizing transformed sequences and enhanced chromatin accessibility with G4Beacon2
- First Published September 22, 2026
Method
Decoding cell division history and lineage-resolved phenotypic patterns from single-cell barcode and transcriptomic data
- First Published September 21, 2026
Research
Spatial genome organization in nematodes with programmed DNA elimination
- First Published September 21, 2026
Method
CircExor enables interpretable prediction of circRNA localization into extracellular vesicles
- First Published September 17, 2026
Research
Ret coding and enhancer loss-of-function alleles cause progressive loss of inhibitory motor neurons in the enteric nervous system" > Combined effects of Ret coding and enhancer loss-of-function alleles cause progressive loss of inhibitory motor neurons in the enteric nervous system
- First Published September 16, 2026
Method
Unifying multimodal single-cell data with a mixture-of-experts β-variational autoencoder framework
- First Published September 16, 2026
Method
Dual-contrastive learning for spatial domain identification in spatial transcriptomics with STAMGC
- First Published September 16, 2026
Resource
SwinePan for pig graph-based pangenome and multiomics data mining
- First Published September 16, 2026
Method
k-mer-based Upstream Preprocessing of long reads for Isoform Discovery" > k-mer-based Upstream Preprocessing of long reads for Isoform Discovery
- First Published September 14, 2026
Resource
Genome-wide survey of spliceosomal snRNA transcripts across hundreds of human biosamples reveals abundant transcription but low maturation level of snRNA variants
- First Published September 4, 2026
Method
Resolving missing human polymorphic inversions and other complex variants from ultralong read data
- First Published September 1, 2026
Research
Quartet-based species tree methods enable fast and consistent tree of blobs reconstruction under the network multispecies coalescent
- First Published August 28, 2026
Method
Identification of differential topologically associating domains from low sequencing depth and pseudobulk chromatin contact maps
- First Published August 28, 2026
Method
Robust annotation and discovery of novel cell types in single-cell ATAC-seq data through cross-modal reference alignment
- First Published August 28, 2026
Method
Achieving spatial multiomics diagonal integration from unaligned serial sections with DIME
- First Published August 26, 2026
Research
A network of steroid receptor transcription factors regulates ovarian chromatin remodeling in the transition to ovulation
- First Published August 25, 2026
Method
Accurate reconstruction of spatial cell-type maps and characterization of domain-specific functions based on a gene-aware heterogeneous network
- First Published August 25, 2026
Method
Bayesian inference of lineage trees by joint analysis of single-cell multimodal lineage-tracing data with BiLinT
- First Published August 21, 2026
Method
A biobank-scale method for learning modulators of gene-environment interaction underlying human complex traits from multiple environmental exposures
- First Published August 18, 2026
Research
Nuclear mitochondrial sequences in great ape telomere-to-telomere genomes
- First Published August 18, 2026
Research
Massively parallel characterization of adolescent idiopathic scoliosis risk variants
- First Published August 17, 2026
Research
Characterizing intra- and intertumor heterogeneity in ovarian high-grade serous carcinoma subtypes using single-cell and spatial transcriptomics
- First Published August 17, 2026
Resource
A pangenome framework uncovers the role of deletions in repeated evolution of cave-derived traits
- First Published August 13, 2026
Method
Detecting somatic mutations in rare clones using single-cell multiomics
- First Published August 13, 2026
Method
A SNP panel for coanalysis of capture and shotgun ancient DNA data
- First Published August 12, 2026
Method
Pattern-Filter structural validation of single-cell RNA-seq reads reduces artifactual barcodes and improves biological resolution
- First Published August 12, 2026
Resource
Uniform processing and analysis of IGVF massively parallel reporter assay data with MPRAsnakeflow
- First Published August 11, 2026
Research
Fetal signatures in the 3D genome of iPSC-derived neurons and their implications for disease modeling
- First Published August 3, 2026
Research
Moderated designs can balance between batch-effect mitigation and cell loss due to hashtag-assisted pooling in single-cell experiments
- First Published July 30, 2026
Method
Knowledge-driven interpretable neural networks provide mechanistic insight
- First Published July 24, 2026
Method
Multisource omic alignment and biological feature discovery with Performer encoder and triplet networks
- First Published July 22, 2026
Method
Mosaic integration of spatial multiomic data based on hierarchical graph contrastive learning with SpatialMOSI
- First Published July 22, 2026