Index by Author

March 2025; 35 (3)
  1. A
  2. B
  3. C
  4. D
  5. E
  6. F
  7. G
  8. H
  9. I
  10. J
  11. K
  12. L
  13. M
  14. N
  15. O
  16. P
  17. Q
  18. R
  19. S
  20. T
  21. U
  22. V
  23. W
  24. X
  25. Y
  26. Z

A

  1. Aagaard, Anne

  2. Abewe, Hosiana

  3. Archer, John

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  4. Arsala, Deanna

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

  5. Atlas, Jared

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

B

  1. Barragán-Borrero, Verónica

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

  2. Bechsgaard, Jesper

  3. Bénitière, Florian

  4. Bezrukov, Ilja

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  5. Bilde, Trine

  6. Buck, Michael J.

    • Nucleosome binding by TP53, TP63, and TP73 is determined by the composition, accessibility, and helical orientation of their binding sites Genome Res. March 2025 35: 404-416; Published in Advance February 10, 2025, doi:10.1101/gr.279541.124

  7. Buendía-Ávila, Daniel

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

C

  1. Castro, Diana

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  2. Chen, Jian-Hai

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

  3. Cheng, Jingqiu

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

D

  1. Datsomor, Alex

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

  2. Deusch, Oliver

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  3. Diezma-Navas, Laura

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

  4. Dombey, Rodolphe

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

  5. Dreyer, Christine

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  6. Du, Kang

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  7. Duret, Laurent

E

  1. Elias, Rana

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

F

  1. Ferrand, Nuno

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

G

  1. Gertz, Jason

  2. Gilbert, M. Thomas P.

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  3. Ginley-Hidinger, Matthew

  4. Godinho, Raquel

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  5. Grønvold, Lars

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

  6. Guiguen, Yann

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  7. Guzzetta, Alexander

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

H

  1. Habring, Anette

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  2. Handelmann, Christopher R.

    • Nucleosome binding by TP53, TP63, and TP73 is determined by the composition, accessibility, and helical orientation of their binding sites Genome Res. March 2025 35: 404-416; Published in Advance February 10, 2025, doi:10.1101/gr.279541.124

  3. Harvey, Thomas

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

  4. Hernández-Alonso, Germán

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  5. Hoffmann, Margarete

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  6. Hvidsten, Torgeir R.

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

K

  1. Kijas, James

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

  2. Kitchen, Noel

L

  1. Landback, Patrick

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

  2. Lanz, Christa

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  3. Lefébure, Tristan

  4. Li, Yang

    • Transcriptomic and proteomic effects of gene deletion are not evolutionarily conserved Genome Res. March 2025 35: 512-521; Published in Advance February 18, 2025, doi:10.1101/gr.280008.124
      OPEN ACCESS ARTICLE

  5. Llaneza, Luis

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  6. Lobo, Diana

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  7. Long, Manyuan

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

  8. López-Bao, José Vicente

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

M

  1. Ma, Jilong

  2. Maezawa, So

    • KRAB zinc-finger proteins regulate endogenous retroviruses to sculpt germline transcriptomes and genome evolution Genome Res. March 2025 35: 417-431; Published in Advance March 12, 2025, doi:10.1101/gr.279924.124

  3. Marí-Ordóñez, Arturo

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

  4. Medini, Hadar

  5. Mishmar, Dan

  6. Monsen, Øystein

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

  7. Morales, Hernán E.

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

N

  1. Namekawa, Satoshi H.

    • KRAB zinc-finger proteins regulate endogenous retroviruses to sculpt germline transcriptomes and genome evolution Genome Res. March 2025 35: 417-431; Published in Advance March 12, 2025, doi:10.1101/gr.279924.124

O

  1. Otsuka, Kai

    • KRAB zinc-finger proteins regulate endogenous retroviruses to sculpt germline transcriptomes and genome evolution Genome Res. March 2025 35: 417-431; Published in Advance March 12, 2025, doi:10.1101/gr.279924.124

P

  1. Pacheco, Carolina

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  2. Pacheco, George

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  3. Ponce-Mañe, Arturo

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

R

  1. Richey, Alexandra

  2. Rush, Craig M.

S

  1. Sakashita, Akihiko

    • KRAB zinc-finger proteins regulate endogenous retroviruses to sculpt germline transcriptomes and genome evolution Genome Res. March 2025 35: 417-431; Published in Advance March 12, 2025, doi:10.1101/gr.279924.124

  2. Sandve, Simen Rød

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

  3. Schartl, Manfred

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  4. Schierup, Mikkel Heide

  5. Schultz, Richard M.

    • KRAB zinc-finger proteins regulate endogenous retroviruses to sculpt germline transcriptomes and genome evolution Genome Res. March 2025 35: 417-431; Published in Advance March 12, 2025, doi:10.1101/gr.279924.124

  6. Shen, Bairong

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

  7. Silva, Pedro

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  8. Sosa, Dylan

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

  9. Suh, Alexander

    • The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication Genome Res. March 2025 35: 475-488; Published in Advance February 12, 2025, doi:10.1101/gr.278931.124

V

  1. Vahrenkamp, Jeffery M.

  2. Van Oosterhout, Cock

    • Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes Genome Res. March 2025 35: 432-445; Published in Advance February 14, 2025, doi:10.1101/gr.279093.124
      OPEN ACCESS ARTICLE

  3. Vargas-Guerrero, José Mario

    • Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza Genome Res. March 2025 35: 522-544; Published in Advance March 4, 2025, doi:10.1101/gr.279532.124
      OPEN ACCESS ARTICLE

  4. Villesen, Palle

W

  1. Weigel, Detlef

    • Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly Genome Res. March 2025 35: 489-498; Published in Advance March 5, 2025, doi:10.1101/gr.279582.124
      OPEN ACCESS ARTICLE

  2. Wilson, Patrick D.

    • Nucleosome binding by TP53, TP63, and TP73 is determined by the composition, accessibility, and helical orientation of their binding sites Genome Res. March 2025 35: 404-416; Published in Advance February 10, 2025, doi:10.1101/gr.279541.124

X

  1. Xia, Shengqian

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

Y

  1. Yu, Xinyang

    • Nucleosome binding by TP53, TP63, and TP73 is determined by the composition, accessibility, and helical orientation of their binding sites Genome Res. March 2025 35: 404-416; Published in Advance February 10, 2025, doi:10.1101/gr.279541.124

Z

  1. Zhang, Jianzhi

    • Transcriptomic and proteomic effects of gene deletion are not evolutionarily conserved Genome Res. March 2025 35: 512-521; Published in Advance February 18, 2025, doi:10.1101/gr.280008.124
      OPEN ACCESS ARTICLE

  2. Zhang, Xiaoyang

  3. Zhang, Yong E.

    • Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection Genome Res. March 2025 35: 379-392; Published in Advance February 14, 2025, doi:10.1101/gr.279498.124
      OPEN ACCESS ARTICLE

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