Volume 34, Issue 6 | June 2024

Mini-Review
- - Large-scale genomic analysis of the domestic dog informs biological discovery
    Reuben M. Buckley
    Elaine A. Ostrander
    First Published July 2, 2024
Research
- - Single-cell discovery of m6A RNA modifications in the hippocampus
    Shuangshuang Feng
    Maitena Tellaetxe-Abete
    Yujie Zhang
    Yan Peng
    Han Zhou
    Mingjie Dong
    ...[+1 authors]...,
    Erika Larrea
    Liang Xue
    Li Zhang
    Magdalena J. Koziol
    First Published July 15, 2024
  - Single-cell analysis reveals transcriptional dynamics in healthy primary parathyroid tissue
    Aarthi Venkat
    Maximillian J. Carlino
    Betty R. Lawton
    Manju L. Prasad
    Matthew Amodio
    Courtney E. Gibson
    ...[+1 authors]...,
    Caroline J. Zeiss
    Scott E. Youlten
    Smita Krishnaswamy
    Diane S. Krause
    First Published July 8, 2024
  - Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
    Xuejing Wang
    Gerald Heckel
    First Published July 2, 2024
  - Causes and consequences of a complex recombinational landscape in the ant Cardiocondyla obscurior
    Mohammed Errbii
    Jürgen Gadau
    Kerstin Becker
    Lukas Schrader
    Jan Oettler
    First Published June 5, 2024
  - Comparative genomics of Cryptosporidium parvum reveals the emergence of an outbreak-associated population in Europe and its spread to the United States
    Greta Bellinzona
    Tiago Nardi
    Michele Castelli
    Gherard Batisti Biffignandi
    Karim Adjou
    Martha Betson Yannick Blanchard Ioana Bujila Rachel Chalmers Rebecca Davidson Nicoletta D'Avino Tuulia Enbom Jacinto Gomes Gregory Karadjian Christian Klotz Emma Östlund Judith Plutzer Ruska Rimhanen-Finne Guy Robinson Anna Rosa Sannella Jacek Sroka Christen Rune Stensvold Karin Troell Paolo Vatta
    ...[+19 authors]...,
    Barbora Zalewska
    Claudio Bandi
    Davide Sassera
    Simone M. Cacciò
    First Published July 8, 2024
  - Large-scale investigation of species-specific orphan genes in the human gut microbiome elucidates their evolutionary origins
    Nikolaos Vakirlis
    Anne Kupczok
    First Published July 8, 2024
Methods
- - Simultaneous assessment of human genome and methylome data in a single experiment using limited deamination of methylated cytosine
    Bo Yan
    Duan Wang
    Laurence Ettwiller
    First Published June 10, 2024
  - Fast and space-efficient taxonomic classification of long reads with hierarchical interleaved XOR filters
    Jens-Uwe Ulrich
    Bernhard Y. Renard
    First Published June 17, 2024
  - Accurate estimation of pathway activity in single cells for clustering and differential analysis
    Daniel Davis
    Avishai Wizel
    Yotam Drier
    First Published July 9, 2024
  - Accurate allocation of multimapped reads enables regulatory element analysis at repeats
    Alexis Morrissey
    Jeffrey Shi
    Daniela Q. James
    Shaun Mahony
    First Published July 10, 2024
Resources
- - DEAD box RNA helicases are pervasive protein kinase interactors and activators
    Alexander Hirth
    Edoardo Fatti
    Eugen Netz
    Sergio P. Acebron
    Dimitris Papageorgiou
    Andrea Švorinić Cristina-Maria Cruciat Emil Karaulanov Alexandr Gopanenko Tianheng Zhu
    ...[+5 authors]...,
    Irmgard Sinning
    Jeroen Krijgsveld
    Oliver Kohlbacher
    Christof Niehrs
    First Published July 10, 2024
  - Global compositional and functional states of the human gut microbiome in health and disease
    Sunjae Lee
    Theo Portlock
    Emmanuelle Le Chatelier
    Fernando Garcia-Guevara
    Frederick Clasen
    Florian Plaza Oñate Nicolas Pons Neelu Begum Azadeh Harzandi Ceri Proffitt Dorines Rosario Stefania Vaga Junseok Park Kalle von Feilitzen Fredric Johansson Cheng Zhang Lindsey A. Edwards Vincent Lombard Franck Gauthier Claire J. Steves David Gomez-Cabrero Bernard Henrissat Doheon Lee Lars Engstrand Debbie L. Shawcross Gordon Proctor Mathieu Almeida Jens Nielsen Adil Mardinoglu
    ...[+24 authors]...,
    David L. Moyes
    Stanislav Dusko Ehrlich
    Mathias Uhlen
    Saeed Shoaie
    First Published July 22, 2024
Corrigendum
- - Corrigendum: Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere
    Lee H. Wong
    Kate H. Brettingham-Moore
    Lyn Chan
    Julie M. Quach
    Melissa A. Anderson
    Emma L. Northrop Ross Hannan
    ...[+2 authors]...,
    Richard Saffery
    Margaret L. Shaw
    Evan Williams
    K.H. Andy Choo
    First Published July 23, 2024

Table of Contents

Volume 34, Issue 6 | June 2024

Mini-Review

Large-scale genomic analysis of the domestic dog informs biological discovery

Research

Single-cell discovery of m6A RNA modifications in the hippocampus

Single-cell analysis reveals transcriptional dynamics in healthy primary parathyroid tissue

Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles

Causes and consequences of a complex recombinational landscape in the ant Cardiocondyla obscurior

Comparative genomics of Cryptosporidium parvum reveals the emergence of an outbreak-associated population in Europe and its spread to the United States

Large-scale investigation of species-specific orphan genes in the human gut microbiome elucidates their evolutionary origins

Methods

Simultaneous assessment of human genome and methylome data in a single experiment using limited deamination of methylated cytosine

Fast and space-efficient taxonomic classification of long reads with hierarchical interleaved XOR filters

Accurate estimation of pathway activity in single cells for clustering and differential analysis

Accurate allocation of multimapped reads enables regulatory element analysis at repeats

Resources

DEAD box RNA helicases are pervasive protein kinase interactors and activators

Global compositional and functional states of the human gut microbiome in health and disease

Corrigendum

Corrigendum: Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere

Table of Contents

Volume 34, Issue 6 | June 2024

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Mini-Review

Research

Methods

Resources

Corrigendum