Volume 33, Issue 11 | November 2023

Research
- - The human genome contains over a million autonomous exons
    Nicholas Stepankiw
    Ally W.H. Yang
    Timothy R. Hughes
    First Published November 9, 2023
  - Characterization of human transcription factor function and patterns of gene regulation in HepG2 cells
    Belle A. Moyers
    E. Christopher Partridge
    Mark Mackiewicz
    Michael J. Betti
    Roshan Darji
    Sarah K. Meadows Kimberly M. Newberry
    ...[+2 authors]...,
    Laurel A. Brandsmeier
    Barbara J. Wold
    Eric M. Mendenhall
    Richard M. Myers
    First Published October 18, 2023
  - E4F1 and ZNF148 are transcriptional activators of the −57A > C and wild-type TERT promoter
    Boon Haow Chua
    Nurkaiyisah Zaal Anuar
    Laure Ferry
    Cecilia Domrane
    Anna Wittek
    Vineeth T. Mukundan Sudhakar Jha
    ...[+2 authors]...,
    Falk Butter
    Daniel G. Tenen
    Pierre-Antoine Defossez
    Dennis Kappei
    First Published November 2, 2023
  - Cellular age explains variation in age-related cell-to-cell transcriptome variability
    Ming Yang
    Benjamin R. Harrison
    Daniel E.L. Promislow
    First Published November 16, 2023
  - Transposon wave remodeled the epigenomic landscape in the rapid evolution of X-Chromosome dosage compensation
    David C.H. Metzger
    Imogen Porter
    Brendan Mobley
    Benjamin A. Sandkam
    Lydia J.M. Fong
    First Published November 21, 2023
  - miRNA-like secondary structures in maize (Zea mays) genes and transposable elements correlate with small RNAs, methylation, and expression
    Galen T. Martin
    Edwin Solares
    Jeanelle Guadardo-Mendez
    Aline Muyle
    Alexandros Bousios
    First Published November 2, 2023
  - Telomeric repeat evolution in the phylum Nematoda revealed by high-quality genome assemblies and subtelomere structures
    Jiseon Lim
    Wonjoo Kim
    Jun Kim
    Junho Lee
    First Published November 2, 2023
  - Genome-wide chromatin interaction profiling reveals a vital role of super-enhancers and rearrangements in host enhancer contacts during BmNPV infection
    Shudi Zhao
    Yuedong Li
    Guanping Chen
    Xingyang Wang
    Nan Chen
    First Published October 23, 2023
  - Proteome-wide structural analysis quantifies structural conservation across distant species
    Shijie Zhang
    Teng Zhang
    Yuan Fu
    First Published November 22, 2023
Methods
- - De novo reconstruction of satellite repeat units from sequence data
    Yujie Zhang
    Justin Chu
    Haoyu Cheng
    Heng Li
    First Published November 2, 2023
  - Integrating SNVs and CNAs on a phylogenetic tree from single-cell DNA sequencing data
    Liting Zhang
    Hank W. Bass
    Jerome Irianto
    Xian Mallory
    First Published November 22, 2023
  - Characterization of meiotic recombination intermediates through gene knockouts in founder hybrid mice
    Benjamin Davies
    Gang Zhang
    Daniela Moralli
    Samy Alghadban
    Daniel Biggs
    First Published November 17, 2023

Table of Contents

Volume 33, Issue 11 | November 2023

Research

The human genome contains over a million autonomous exons

Characterization of human transcription factor function and patterns of gene regulation in HepG2 cells

E4F1 and ZNF148 are transcriptional activators of the −57A > C and wild-type TERT promoter

Cellular age explains variation in age-related cell-to-cell transcriptome variability

Transposon wave remodeled the epigenomic landscape in the rapid evolution of X-Chromosome dosage compensation

miRNA-like secondary structures in maize (Zea mays) genes and transposable elements correlate with small RNAs, methylation, and expression

Telomeric repeat evolution in the phylum Nematoda revealed by high-quality genome assemblies and subtelomere structures

Genome-wide chromatin interaction profiling reveals a vital role of super-enhancers and rearrangements in host enhancer contacts during BmNPV infection

Proteome-wide structural analysis quantifies structural conservation across distant species

Methods

De novo reconstruction of satellite repeat units from sequence data

Integrating SNVs and CNAs on a phylogenetic tree from single-cell DNA sequencing data

Characterization of meiotic recombination intermediates through gene knockouts in founder hybrid mice

Table of Contents

Volume 33, Issue 11 | November 2023

Share this issue

Research

Methods