Volume 32, Issue 11-12 | November 2022

Research
- - Non-Mendelian inheritance patterns and extreme deviation rates of CGG repeats in autism
    Dale J. Annear
    Geert Vandeweyer
    Alba Sanchis-Juan
    F. Lucy Raymond
    R. Frank Kooy
    First Published November 9, 2022
  - Redistribution of lamina-associated domains reshapes binding of pioneer factor FOXA2 in development of nonalcoholic fatty liver disease
    Xiaolong Wei
    Megan A. Murphy
    Nihal A. Reddy
    Yi Hao
    Taylor G. Eggertsen
    First Published December 15, 2022
  - Gene essentiality in cancer cell lines is modified by the sex chromosomes
    Shahar Shohat
    Ethel Vol
    Sagiv Shifman
    First Published November 23, 2022
  - Systematic transcriptome analysis associated with physiological and chronological aging in Caenorhabditis elegans
    Seokjin Ham
    Sieun S. Kim
    Sangsoon Park
    Eun Ji E. Kim
    Sujeong Kwon
    First Published November 9, 2022
  - Genetic exchange with an outcrossing sister species causes severe genome-wide dysregulation in a selfing Caenorhabditis nematode
    Dongying Xie
    Pohao Ye
    Yiming Ma
    Yongbin Li
    Xiao Liu
    First Published November 9, 2022
  - Developmental timing of programmed DNA elimination in Paramecium tetraurelia recapitulates germline transposon evolutionary dynamics
    Coralie Zangarelli
    Olivier Arnaiz
    Mickaël Bourge
    Kevin Gorrichon
    Yan Jaszczyszyn
    First Published November 23, 2022
  - Hybridization drives mitochondrial DNA degeneration and metabolic shift in a species with biparental mitochondrial inheritance
    Mathieu Hénault
    Souhir Marsit
    Guillaume Charron
    Christian R. Landry
    First Published November 9, 2022
Methods
- - Direct detection of natural selection in Bronze Age Britain
    Iain Mathieson
    Jonathan Terhorst
    First Published October 31, 2022
  - Three assays for in-solution enrichment of ancient human DNA at more than a million SNPs
    Nadin Rohland
    Swapan Mallick
    Matthew Mah
    Robert Maier
    Nick Patterson
    First Published December 14, 2022
  - Methyl-SNP-seq reveals dual readouts of methylome and variome at molecule resolution while enabling target enrichment
    Bo Yan
    Duan Wang
    Romualdas Vaisvila
    Zhiyi Sun
    Laurence Ettwiller
    First Published November 4, 2022
  - Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2
    Alexander Zee
    Dori Z.Q. Deng
    Matthew Adams
    Kayla D. Schimke
    Russell Corbett-Detig
    First Published November 9, 2022
  - Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
    Andrey V. Bzikadze
    Alla Mikheenko
    Pavel A. Pevzner
    First Published November 15, 2022
  - Analyzing rare mutations in metagenomes assembled using long and accurate reads
    Marcus W. Fedarko
    Mikhail Kolmogorov
    Pavel A. Pevzner
    First Published November 23, 2022
  - Estimation of intrafamilial DNA contamination in family trio genome sequencing using deviation from Mendelian inheritance
    Christopher J. Yoon
    Su Yeon Kim
    Chang Hyun Nam
    Junehawk Lee
    Jung Woo Park
    Jihyeob Mun Seongyeol Park Soyoung Lee Boram Yi Kyoung Il Min Brian Wiley Kelly L. Bolton Jeong Ho Lee Eunjoon Kim Hee Jeong Yoo Jong Kwan Jun
    ...[+11 authors]...,
    Ji Seon Choi
    Malachi Griffith
    Obi L. Griffith
    Young Seok Ju
    First Published December 6, 2022
Erratum
- - Erratum: A butterfly pan-genome reveals that a large amount of structural variation underlies the evolution of chromatin accessibility
    Angelo A. Ruggieri
    Luca Livraghi
    James J. Lewis
    Elizabeth Evans
    Francesco Cicconardi
    Laura Hebberecht Yadira Ortiz-Ruiz Stephen H. Montgomery Alfredo Ghezzi José Arcadio Rodriguez-Martinez Chris D. Jiggins
    ...[+6 authors]...,
    W. Owen McMillan
    Brian A. Counterman
    Riccardo Papa
    Steven M. Van Belleghem
    First Published December 22, 2022
Reviewer Index
- - Reviewer Index, Volume 32, 2022
    First Published December 22, 2022

Table of Contents

Volume 32, Issue 11-12 | November 2022

Research

Non-Mendelian inheritance patterns and extreme deviation rates of CGG repeats in autism

Redistribution of lamina-associated domains reshapes binding of pioneer factor FOXA2 in development of nonalcoholic fatty liver disease

Gene essentiality in cancer cell lines is modified by the sex chromosomes

Systematic transcriptome analysis associated with physiological and chronological aging in Caenorhabditis elegans

Genetic exchange with an outcrossing sister species causes severe genome-wide dysregulation in a selfing Caenorhabditis nematode

Developmental timing of programmed DNA elimination in Paramecium tetraurelia recapitulates germline transposon evolutionary dynamics

Hybridization drives mitochondrial DNA degeneration and metabolic shift in a species with biparental mitochondrial inheritance

Methods

Direct detection of natural selection in Bronze Age Britain

Three assays for in-solution enrichment of ancient human DNA at more than a million SNPs

Methyl-SNP-seq reveals dual readouts of methylome and variome at molecule resolution while enabling target enrichment

Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2

Fast and accurate mapping of long reads to complete genome assemblies with VerityMap

Analyzing rare mutations in metagenomes assembled using long and accurate reads

Estimation of intrafamilial DNA contamination in family trio genome sequencing using deviation from Mendelian inheritance

Erratum

Erratum: A butterfly pan-genome reveals that a large amount of structural variation underlies the evolution of chromatin accessibility

Reviewer Index

Reviewer Index, Volume 32, 2022

Table of Contents

Volume 32, Issue 11-12 | November 2022

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Research

Methods

Erratum

Reviewer Index