Volume 27, Issue 8 | August 2017

Research
- - Single-cell DNA sequencing reveals a late-dissemination model in metastatic colorectal cancer
    Marco L. Leung
    Alexander Davis
    Ruli Gao
    Anna Casasent
    Yong Wang
    Emi Sei
    ...[+1 authors]...,
    Eduardo Vilar
    Dipen Maru
    Scott Kopetz
    Nicholas E. Navin
    First Published May 25, 2017
  - Integrated single-cell genetic and transcriptional analysis suggests novel drivers of chronic lymphocytic leukemia
    Lili Wang
    Jean Fan
    Joshua M. Francis
    George Georghiou
    Sarah Hergert
    Shuqiang Li Rutendo Gambe Chensheng W. Zhou Chunxiao Yang Sheng Xiao Paola Dal Cin Michaela Bowden Dylan Kotliar Sachet A. Shukla Jennifer R. Brown Donna Neuberg Dario R. Alessi
    ...[+12 authors]...,
    Cheng-Zhong Zhang
    Peter V. Kharchenko
    Kenneth J. Livak
    Catherine J. Wu
    First Published July 5, 2017
  - Single-cell sequencing deciphers a convergent evolution of copy number alterations from primary to circulating tumor cells
    Yan Gao
    Xiaohui Ni
    Hua Guo
    Zhe Su
    Yi Ba
    Zhongsheng Tong Zhi Guo Xin Yao Xixi Chen Jian Yin Zhao Yan Lin Guo
    ...[+7 authors]...,
    Ying Liu
    Fan Bai
    X. Sunney Xie
    Ning Zhang
    First Published May 9, 2017
  - Integrated genome and transcriptome sequencing identifies a noncoding mutation in the genome replication factor DONSON as the cause of microcephaly-micromelia syndrome
    Gilad D. Evrony
    Dwight R. Cordero
    Jun Shen
    Jennifer N. Partlow
    Timothy W. Yu
    Rachel E. Rodin R. Sean Hill Michael E. Coulter Anh-Thu N. Lam Divya Jayaraman Dianne Gerrelli Diana G. Diaz Chloe Santos Victoria Morrison Antonella Galli Ulrich Tschulena Stefan Wiemann M. Jocelyne Martel Betty Spooner Steven C. Ryu Princess C. Elhosary Jillian M. Richardson Danielle Tierney Christopher A. Robinson Rajni Chibbar Dana Diudea Rebecca Folkerth Sheldon Wiebe A. James Barkovich Ganeshwaran H. Mochida
    ...[+25 authors]...,
    James Irvine
    Edmond G. Lemire
    Patricia Blakley
    Christopher A. Walsh
    First Published June 19, 2017
  - Human mismatch repair system balances mutation rates between strands by removing more mismatches from the lagging strand
    Maria A. Andrianova
    Georgii A. Bazykin
    Sergey I. Nikolaev
    Vladimir B. Seplyarskiy
    First Published May 16, 2017
  - DDX54 regulates transcriptome dynamics during DNA damage response
    Miha Milek
    Koshi Imami
    Neelanjan Mukherjee
    Francesca De Bortoli
    Ulrike Zinnall
    Orsalia Hazapis Christian Trahan Marlene Oeffinger
    ...[+3 authors]...,
    Florian Heyd
    Uwe Ohler
    Matthias Selbach
    Markus Landthaler
    First Published June 8, 2017
  - Ancient antagonism between CELF and RBFOX families tunes mRNA splicing outcomes
    Matthew R. Gazzara
    Michael J. Mallory
    Renat Roytenberg
    John P. Lindberg
    Anupama Jha
    First Published May 16, 2017
  - The identification and functional annotation of RNA structures conserved in vertebrates
    Stefan E. Seemann
    Aashiq H. Mirza
    Claus Hansen
    Claus H. Bang-Berthelsen
    Christian Garde
    Mikkel Christensen-Dalsgaard Elfar Torarinsson Zizhen Yao Christopher T. Workman Flemming Pociot
    ...[+5 authors]...,
    Henrik Nielsen
    Niels Tommerup
    Walter L. Ruzzo
    Jan Gorodkin
    First Published May 9, 2017
  - Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes
    Vedran Franke
    Sravya Ganesh
    Rosa Karlic
    Radek Malik
    Josef Pasulka
    Filip Horvat Maja Kuzman Helena Fulka Marketa Cernohorska Jana Urbanova Eliska Svobodova Jun Ma Yutaka Suzuki
    ...[+8 authors]...,
    Fugaku Aoki
    Richard M. Schultz
    Kristian Vlahovicek
    Petr Svoboda
    First Published May 18, 2017
  - Heritable L1 retrotransposition in the mouse primordial germline and early embryo
    Sandra R. Richardson
    Patricia Gerdes
    Daniel J. Gerhardt
    Francisco J. Sanchez-Luque
    Gabriela-Oana Bodea
    Martin Muñoz-Lopez J. Samuel Jesuadian Marie-Jeanne H.C. Kempen Patricia E. Carreira Jeffrey A. Jeddeloh
    ...[+5 authors]...,
    Jose L. Garcia-Perez
    Haig H. Kazazian
    Adam D. Ewing
    Geoffrey J. Faulkner
    First Published May 8, 2017
  - DNA replication timing during development anticipates transcriptional programs and parallels enhancer activation
    Joseph C. Siefert
    Constantin Georgescu
    Jonathan D. Wren
    Amnon Koren
    Christopher L. Sansam
    First Published May 16, 2017
  - The house fly Y Chromosome is young and minimally differentiated from its ancient X Chromosome partner
    Richard P. Meisel
    Christopher A. Gonzales
    Hoang Luu
    First Published June 15, 2017
  - Dehydration stress extends mRNA 3′ untranslated regions with noncoding RNA functions in Arabidopsis
    Hai-Xi Sun
    Yan Li
    Qi-Wen Niu
    Nam-Hai Chua
    First Published May 18, 2017
  - Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131
    Teemu Kallonen
    Hayley J. Brodrick
    Simon R. Harris
    Jukka Corander
    Nicholas M. Brown
    First Published July 18, 2017
Resource
- - GenomeVIP: a cloud platform for genomic variant discovery and interpretation
    R. Jay Mashl
    Adam D. Scott
    Kuan-lin Huang
    Matthew A. Wyczalkowski
    Christopher J. Yoon
    Beifang Niu Erin DeNardo Venkata D. Yellapantula Robert E. Handsaker Ken Chen Daniel C. Koboldt Kai Ye
    ...[+7 authors]...,
    David Fenyö
    Benjamin J. Raphael
    Michael C. Wendl
    Li Ding
    First Published May 18, 2017
Corrigendum
- - Corrigendum: TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code
    Modi Safra
    Ronit Nir
    Daneyal Farouq
    Ilya Vainberg Slutskin
    Schraga Schwartz
    First Published August 1, 2017

Table of Contents

Volume 27, Issue 8 | August 2017

Research

Single-cell DNA sequencing reveals a late-dissemination model in metastatic colorectal cancer

Integrated single-cell genetic and transcriptional analysis suggests novel drivers of chronic lymphocytic leukemia

Single-cell sequencing deciphers a convergent evolution of copy number alterations from primary to circulating tumor cells

Integrated genome and transcriptome sequencing identifies a noncoding mutation in the genome replication factor DONSON as the cause of microcephaly-micromelia syndrome

Human mismatch repair system balances mutation rates between strands by removing more mismatches from the lagging strand

DDX54 regulates transcriptome dynamics during DNA damage response

Ancient antagonism between CELF and RBFOX families tunes mRNA splicing outcomes

The identification and functional annotation of RNA structures conserved in vertebrates

Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes

Heritable L1 retrotransposition in the mouse primordial germline and early embryo

DNA replication timing during development anticipates transcriptional programs and parallels enhancer activation

The house fly Y Chromosome is young and minimally differentiated from its ancient X Chromosome partner

Dehydration stress extends mRNA 3′ untranslated regions with noncoding RNA functions in Arabidopsis

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

Resource

GenomeVIP: a cloud platform for genomic variant discovery and interpretation

Corrigendum

Corrigendum: TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code

Table of Contents

Volume 27, Issue 8 | August 2017

Share this issue

Research

Resource

Corrigendum