Volume 15, Issue 4 | April 2005

In This Issue
- - Flower Power
    Hillary E. Sussman
    First Published April 1, 2005
ARTICLES
- - The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern
    Francisco M. De La Vega
    Hadar Isaac
    Andrew Collins
    Charles R. Scafe
    Bjarni V. Halldórsson
    Xiaoping Su Ross A. Lippert Yu Wang Marion Laig-Webster Ryan T. Koehler Janet S. Ziegle Lewis T. Wogan Junko F. Stevens Kyle M. Leinen Sheri J. Olson Karl J. Guegler Xiaoqing You Lily H. Xu Heinz G. Hemken Francis Kalush Mitsuo Itakura Yi Zheng Guy de Thé Stephen J. O'Brien Andrew G. Clark
    ...[+20 authors]...,
    Sorin Istrail
    Michael W. Hunkapiller
    Eugene G. Spier
    Dennis A. Gilbert
    First Published March 21, 2005
  - Disclosing hidden transcripts: Mouse natural sense–antisense transcripts tend to be poly(A) negative and nuclear localized
    Hidenori Kiyosawa
    Nathan Mise
    Shigeru Iwase
    Yoshihide Hayashizaki
    Kuniya Abe
    First Published March 21, 2005
  - Analysis of the floral transcriptome uncovers new regulators of organ determination and gene families related to flower organ differentiation in Gerbera hybrida (Asteraceae)
    Roosa A.E. Laitinen
    Juha Immanen
    Petri Auvinen
    Stephen Rudd
    Edward Alatalo
    Lars Paulin Miia Ainasoja
    ...[+2 authors]...,
    Mika Kotilainen
    Satu Koskela
    Teemu H. Teeri
    Paula Elomaa
    First Published March 21, 2005
LETTERS
- - Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis
    Mulu Ayele
    Brian J. Haas
    Nikhil Kumar
    Hank Wu
    Yongli Xiao
    Susan Van Aken
    ...[+1 authors]...,
    Teresa R. Utterback
    Jennifer R. Wortman
    Owen R. White
    Christopher D. Town
    First Published April 1, 2005
  - Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana
    Manpreet S. Katari
    Vivekanand Balija
    Richard K. Wilson
    Robert A. Martienssen
    W. Richard McCombie
    First Published April 1, 2005
  - Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana
    Krithika Yogeeswaran
    Amy Frary
    Thomas L. York
    Alison Amenta
    Andrew H. Lesser
    First Published April 1, 2005
  - Chromosome triplication found across the tribe Brassiceae
    Martin A. Lysak
    Marcus A. Koch
    Ales Pecinka
    Ingo Schubert
    First Published March 21, 2005
  - Ancient haplotypes resulting from extensive molecular rearrangements in the wheat A genome have been maintained in species of three different ploidy levels
    Edwige Isidore
    Beatrice Scherrer
    Boulos Chalhoub
    Catherine Feuillet
    Beat Keller
    First Published April 1, 2005
  - Functional insights from the distribution and role of homopeptide repeat-containing proteins
    Noel G. Faux
    Stephen P. Bottomley
    Arthur M. Lesk
    James A. Irving
    John R. Morrison
    First Published April 1, 2005
  - Novel specificities emerge by stepwise duplication of functional modules
    José B. Pereira-Leal
    Sarah A. Teichmann
    First Published April 1, 2005
Methods
- - Forcing interactions as a genetic screen to identify proteins that exert a defined activity
    Michael DeVit
    Paul J. Cullen
    Margaret Branson
    George F. Sprague
    Stanley Fields
    First Published April 1, 2005
  - ECgene: Genome-based EST clustering and gene modeling for alternative splicing
    Namshin Kim
    Seokmin Shin
    Sanghyuk Lee
    First Published April 1, 2005
RESOURCES
- - Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions
    Chaochun Wei
    Philippe Lamesch
    Manimozhiyan Arumugam
    Jennifer Rosenberg
    Ping Hu
    First Published April 1, 2005
  - Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: A tool for identifying differentially regulated genes
    Shawn Lewenza
    Reza K. Falsafi
    Geoff Winsor
    W. James Gooderham
    Joseph B. McPhee
    First Published April 1, 2005
  - CADLIVE dynamic simulator: Direct link of biochemical networks to dynamic models
    Hiroyuki Kurata
    Kouichi Masaki
    Yoshiyuki Sumida
    Rei Iwasaki
    First Published April 1, 2005
ERRATA
- - Correction for Volume 15, p. 231
    Janet M. Young
    Marijo Kambere
    Barbara J. Trask
    Robert P. Lane
    First Published April 1, 2005
  - Correction for Volume 15, p. 376
    First Published April 1, 2005

Table of Contents

Volume 15, Issue 4 | April 2005

In This Issue

Flower Power

ARTICLES

The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern

Disclosing hidden transcripts: Mouse natural sense–antisense transcripts tend to be poly(A) negative and nuclear localized

Analysis of the floral transcriptome uncovers new regulators of organ determination and gene families related to flower organ differentiation in Gerbera hybrida (Asteraceae)

LETTERS

Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis

Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana

Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana

Chromosome triplication found across the tribe Brassiceae

Ancient haplotypes resulting from extensive molecular rearrangements in the wheat A genome have been maintained in species of three different ploidy levels

Functional insights from the distribution and role of homopeptide repeat-containing proteins

Novel specificities emerge by stepwise duplication of functional modules

Methods

Forcing interactions as a genetic screen to identify proteins that exert a defined activity

ECgene: Genome-based EST clustering and gene modeling for alternative splicing

RESOURCES

Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions

Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: A tool for identifying differentially regulated genes

CADLIVE dynamic simulator: Direct link of biochemical networks to dynamic models

ERRATA

Correction for Volume 15, p. 231

Correction for Volume 15, p. 376

Table of Contents

Volume 15, Issue 4 | April 2005

Share this issue

In This Issue

ARTICLES

LETTERS

Methods

RESOURCES

ERRATA