Volume 15, Issue 3 | March 2005

ARTICLES
- - Complex genomic rearrangements lead to novel primate gene function
    Francesca D. Ciccarelli
    Christian von Mering
    Mikita Suyama
    Eoghan D. Harrington
    Elisa Izaurralde
    First Published February 14, 2005
  - Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes
    Toshiaki Fukui
    Haruyuki Atomi
    Tamotsu Kanai
    Rie Matsumi
    Shinsuke Fujiwara
    First Published February 14, 2005
LETTERS
- - Naturally occurring antisense: Transcriptional leakage or real overlap?
    Dvir Dahary
    Orna Elroy-Stein
    Rotem Sorek
    First Published February 14, 2005
  - Computational analysis of 3′-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat
    Jun Yan
    Thomas G. Marr
    First Published March 1, 2005
  - Protein interaction mapping: A Drosophila case study
    Etienne Formstecher
    Sandra Aresta
    Vincent Collura
    Alexandre Hamburger
    Alain Meil
    Alexandra Trehin Céline Reverdy Virginie Betin Sophie Maire Christine Brun Bernard Jacq Monique Arpin Yohanns Bellaiche Saverio Bellusci Philippe Benaroch Michel Bornens Roland Chanet Philippe Chavrier Olivier Delattre Valérie Doye Richard Fehon Gérard Faye Thierry Galli Jean-Antoine Girault Bruno Goud Jean de Gunzburg Ludger Johannes Marie-Pierre Junier Vincent Mirouse Ashim Mukherjee Dora Papadopoulo Franck Perez Anne Plessis Carine Rossé Simon Saule Dominique Stoppa-Lyonnet Alain Vincent Michael White
    ...[+33 authors]...,
    Pierre Legrain
    Jérôme Wojcik
    Jacques Camonis
    Laurent Daviet
    First Published February 14, 2005
  - Protein structure and evolutionary history determine sequence space topology
    Boris E. Shakhnovich
    Eric Deeds
    Charles Delisi
    Eugene Shakhnovich
    First Published March 1, 2005
  - Prokaryotic phylogenies inferred from protein structural domains
    Eric J. Deeds
    Hooman Hennessey
    Eugene I. Shakhnovich
    First Published March 1, 2005
  - From genome to “venome”: Molecular origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences and related body proteins
    Bryan G. Fry
    First Published March 1, 2005
Methods
- - DIP-chip: Rapid and accurate determination of DNA-binding specificity
    Xiao Liu
    David M. Noll
    Jason D. Lieb
    Neil D. Clarke
    First Published February 14, 2005
  - Post-entrapment genome engineering: First exon size does not affect the expression of fusion transcripts generated by gene entrapment
    Anna B. Osipovich
    Aparna Singh
    H. Earl Ruley
    First Published March 1, 2005
RESOURCES
- - novoSNP, a novel computational tool for sequence variation discovery
    Stefan Weckx
    Jurgen Del-Favero
    Rosa Rademakers
    Lieve Claes
    Marc Cruts
    First Published March 1, 2005
  - Database of mRNA gene expression profiles of multiple human organs
    Chang Gue Son
    Sven Bilke
    Sean Davis
    Braden T. Greer
    Jun S. Wei
    First Published March 1, 2005
ERRATUM
- - Correction for Volume 14, p. 2412
    First Published March 1, 2005

Table of Contents

Volume 15, Issue 3 | March 2005

ARTICLES

Complex genomic rearrangements lead to novel primate gene function

Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes

LETTERS

Naturally occurring antisense: Transcriptional leakage or real overlap?

Computational analysis of 3′-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat

Protein interaction mapping: A Drosophila case study

Protein structure and evolutionary history determine sequence space topology

Prokaryotic phylogenies inferred from protein structural domains

From genome to “venome”: Molecular origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences and related body proteins

Methods

DIP-chip: Rapid and accurate determination of DNA-binding specificity

Post-entrapment genome engineering: First exon size does not affect the expression of fusion transcripts generated by gene entrapment

RESOURCES

novoSNP, a novel computational tool for sequence variation discovery

Database of mRNA gene expression profiles of multiple human organs

ERRATUM

Correction for Volume 14, p. 2412

Table of Contents

Volume 15, Issue 3 | March 2005

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ARTICLES

LETTERS

Methods

RESOURCES

ERRATUM