Method
Balancing gene ontology annotation specificity in protein function prediction based on the protein sequence large graph
- First Published April 15, 2026
Method
Highly efficient and scarless genome editing via essential gene-coupled homology-directed repair
- First Published April 15, 2026
Research
Drosophila innate immune response" > A genome-wide survey reveals a diverse array of enhancers coordinates the Drosophila innate immune response
- First Published April 15, 2026
Research
Epigenetic characterization of pseudogenes across human tissues
- First Published April 15, 2026
Method
Dynamics of intronic polyadenylation in the hematopoietic lineage and its regulation by DNA methylation
- First Published April 13, 2026
Resource
Lignature provides a curated resource of ligand induced transcriptomic signatures for signaling inference
- First Published April 8, 2026
Method
Nanopore sequencing identifies high-frequency somatic structural variations in laryngeal squamous cell carcinoma genomes
- First Published April 8, 2026
Method
Enabling efficient and robust analysis of tandem repeats in genomic data using wavefront-based string decomposer
- First Published April 8, 2026
Method
Incorporating valuable prior knowledge to improve deep learning prediction of genetic perturbation responses
- First Published March 26, 2026
Resource
Isoform- and pathway-specific regulation of post-transcriptional RNA processing in human cells
- First Published March 26, 2026
Method
k-mer cross-species profiling reveals taxon-specific TE expansions accompanied by KZFP co-option and functional impacts in ruminants" > k-mer cross-species profiling reveals taxon-specific TE expansions accompanied by KZFP co-option and functional impacts in ruminants
- First Published March 23, 2026
Method
High-resolution genotype-free mapping of genetic variation with CRI-SPA-Map
- First Published March 23, 2026
Method
Restoring the potency of neutralizing antibody via guided hypermutation with hyper-antibody editor
- First Published March 19, 2026
Research
Genomic regulatory landscape underlying the antiviral response of Atlantic salmon
- First Published October 22, 2025
Resource
Integrative chromatin state annotation of 234 human ENCODE4 cell types using Segway
- First Published October 6, 2025
Resource
Exploring the epigenome profiles of repetitive elements with the WashU Repeat Browser
- First Published February 21, 2025
Perspective
Reading TE leaves: New approaches to the identification of transposable element insertions
- First Published June 1, 2011
Perspective
Gene regulatory networks and the role of robustness and stochasticity in the control of gene expression
- First Published February 4, 2011
Perspective
Transgenerational epigenetic inheritance: More questions than answers
- First Published November 1, 2010
Perspective
Assembly of large genomes using second-generation sequencing
- First Published May 27, 2010
Perspective
Phylogenomics of primates and their ancestral populations
- First Published October 3, 2009
RESOURCE
De novo fragment assembly with short mate-paired reads: Does the read length matter?
- First Published December 3, 2008
RESOURCE
Dissecting the effects of mtDNA variations on complex traits using mouse conplastic strains
- First Published November 26, 2008
Methods
MSB: A mean-shift-based approach for the analysis of structural variation in the genome
- First Published November 26, 2008
RESOURCE
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
- First Published November 24, 2008
RESOURCE
Caenorhabditis elegans microRNA promoter activity" > Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity
- First Published November 3, 2008
Methods
Hox cis-regulatory elements" > Multigenome DNA sequence conservation identifies Hox cis-regulatory elements
- First Published November 3, 2008
Methods
cis-regulatory variation in human haplotypes" > Targeted screening of cis-regulatory variation in human haplotypes
- First Published October 29, 2008
RESOURCE
A resource for the simultaneous high-resolution mapping of multiple quantitative trait loci in rats: The NIH heterogeneous stock
- First Published October 29, 2008