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  From First Base: The Sequence of the Tip of the X Chromosome of Drosophila melanogaster, a Comparison of Two Sequencing Strategies

  • Panayiotis V. Benos,
  • Melanie K. Gatt,
  • Lee Murphy,
  • David Harris,
  • Bart Barrell,
  • Concepcion Ferraz,
  • Sophie Vidal,
  • Christine Brun,
  • Jacques Demaille,
  • Edouard Cadieu,
  • Stephane Dreano,
  • Stéphanie Gloux,
  • Valerie Lelaure,
  • Stephanie Mottier,
  • Francis Galibert,
  • Dana Borkova,
  • Belen Miñana,
  • Fotis C. Kafatos,
  • Slava Bolshakov,
  • Inga Sidén-Kiamos,
  • George Papagiannakis,
  • Lefteris Spanos,
  • Christos Louis,
  • Encarnación Madueño,
  • Beatriz de Pablos,
  • Juan Modolell,
  • Annette Peter,
  • Petra Schöttler,
  • Meike Werner,
  • Fotini Mourkioti,
  • Nicole Beinert,
  • Gordon Dowe,
  • Ulrich Schäfer,
  • Herbert Jäckle,
  • Alain Bucheton,
  • Debbie Callister,
  • Lorna Campbell,
  • Nadine S. Henderson,
  • Paul J. McMillan,
  • Cathy Salles,
  • Evelyn Tait,
  • Phillipe Valenti,
  • Robert D.C. Saunders,
  • Alain Billaud,
  • Lior Pachter,
  • David M. Glover,
  • and Michael Ashburner

  Genome Res. May 1, 2001 11: 710-730; doi:10.1101/gr.173801
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  The Complete Genome Sequence of the Lactic Acid Bacterium Lactococcus lactis ssp. lactis IL1403

  • Alexander Bolotin,
  • Patrick Wincker,
  • Stéphane Mauger,
  • Olivier Jaillon,
  • Karine Malarme,
  • Jean Weissenbach,
  • S. Dusko Ehrlich,
  • and Alexei Sorokin

  Genome Res. May 1, 2001 11: 731-753; Published in Advance April 11, 2001, doi:10.1101/gr.169701
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  The Basic Helix-Loop-Helix Protein Family: Comparative Genomics and Phylogenetic Analysis

  • Valérie Ledent and
  • Michel Vervoort

  Genome Res. May 1, 2001 11: 754-770; doi:10.1101/gr.177001
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  Ancient Genome Duplications Did Not Structure the Human Hox-Bearing Chromosomes

  • Austin L. Hughes,
  • Jack da Silva,
  • and Robert Friedman

  Genome Res. May 1, 2001 11: 771-780; Published in Advance April 11, 2001, doi:10.1101/gr.160001
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  Euteleost Fish Genomes are Characterized by Expansion of Gene Families

  • Marc Robinson-Rechavi,
  • Oriane Marchand,
  • Héctor Escriva,
  • Pierre-Luc Bardet,
  • Dominique Zelus,
  • Sandrine Hughes,
  • and Vincent Laudet

  Genome Res. May 1, 2001 11: 781-788; doi:10.1101/gr.165601
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  Genomic Anatomy of a Premier Major Histocompatibility Complex Paralogous Region on Chromosome 1q21–q22

  • Takashi Shiina,
  • Asako Ando,
  • Yumiko Suto,
  • Fumio Kasai,
  • Atsuko Shigenari,
  • Nobusada Takishima,
  • Eri Kikkawa,
  • Kyoko Iwata,
  • Yuko Kuwano,
  • Yuka Kitamura,
  • Yumiko Matsuzawa,
  • Kazumi Sano,
  • Masahiro Nogami,
  • Hisako Kawata,
  • Suyun Li,
  • Yasuhito Fukuzumi,
  • Masaaki Yamazaki,
  • Hiroyuki Tashiro,
  • Gen Tamiya,
  • Atsushi Kohda,
  • Katsuzumi Okumura,
  • Toshimichi Ikemura,
  • Eiichi Soeda,
  • Nobuhisa Mizuki,
  • Minoru Kimura,
  • Seiamak Bahram,
  • and Hidetoshi Inoko

  Genome Res. May 1, 2001 11: 789-802; doi:10.1101/gr.175801
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  Computational Inference of Homologous Gene Structures in the Human Genome

  • Ru-Fang Yeh,
  • Lee P. Lim,
  • and Christopher B. Burge

  Genome Res. May 1, 2001 11: 803-816; doi:10.1101/gr.175701
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  Evaluation of Gene-Finding Programs on Mammalian Sequences

  • Sanja Rogic,
  • Alan K. Mackworth,
  • and Francis B.F. Ouellette

  Genome Res. May 1, 2001 11: 817-832; doi:10.1101/gr.147901
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  Characterization of the Genomic Xist Locus in Rodents Reveals Conservation of Overall Gene Structure and Tandem Repeats but Rapid Evolution of Unique Sequence

  • Tatyana B. Nesterova,
  • Sergey Ya. Slobodyanyuk,
  • Eugene A. Elisaphenko,
  • Alexander I. Shevchenko,
  • Colette Johnston,
  • Marina E. Pavlova,
  • Igor B. Rogozin,
  • Nikolay N. Kolesnikov,
  • Neil Brockdorff,
  • and Suren M. Zakian

  Genome Res. May 1, 2001 11: 833-849; doi:10.1101/gr.174901
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  Human–Ovine Comparative Sequencing of a 250-kb Imprinted Domain Encompassing the Callipyge (clpg) Locus and Identification of Six Imprinted Transcripts: DLK1, DAT, GTL2, PEG11, antiPEG11, and MEG8

  • Carole Charlier,
  • Karin Segers,
  • Danny Wagenaar,
  • Latifa Karim,
  • Stéphane Berghmans,
  • Olivier Jaillon,
  • Tracy Shay,
  • Jean Weissenbach,
  • Noelle Cockett,
  • Gabor Gyapay,
  • and Michel Georges

  Genome Res. May 1, 2001 11: 850-862; doi:10.1101/gr.172701
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