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Table of Contents
April 2000; 10 (4)
INSIGHT/OUTLOOK
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A Biologist's View of the
Drosophila
Genome Annotation Assessment Project
Michael Ashburner
Genome Res.
April 1, 2000
10
:
391
-
393
;
doi:
10.1101/gr.10.4.391
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Gene-Finding Approaches for Eukaryotes
Gary D. Stormo
Genome Res.
April 1, 2000
10
:
394
-
397
;
doi:
10.1101/gr.10.4.394
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Powers and Pitfalls in Sequence Analysis: The 70% Hurdle
Peer Bork
Genome Res.
April 1, 2000
10
:
398
-
400
;
doi:
10.1101/gr.10.4.398
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REVIEW
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Evolution and Variation of the Yeast (
Saccharomyces
) Genome
Robert K. Mortimer
Genome Res.
April 1, 2000
10
:
403
-
409
;
doi:
10.1101/gr.10.4.403
Abstract
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REPORT
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Frequent Human Genomic DNA Transduction Driven by LINE-1 Retrotransposition
Oxana K. Pickeral
,
Wojciech Makałowski
,
Mark S. Boguski
,
and
Jef D. Boeke
Genome Res.
April 1, 2000
10
:
411
-
415
;
doi:
10.1101/gr.10.4.411
Abstract
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ARTICLES
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Large-Scale Comparison of Fungal Sequence Information: Mechanisms of Innovation in
Neurospora crassa
and Gene Loss in
Saccharomyces cerevisiae
Edward L. Braun
,
Aaron L. Halpern
,
Mary Anne Nelson
,
and
Donald O. Natvig
Genome Res.
April 1, 2000
10
:
416
-
430
;
doi:
10.1101/gr.10.4.416
Abstract
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Systematic Management and Analysis of Yeast Gene Expression Data
John Aach
,
Wayne Rindone
,
and
George M. Church
Genome Res.
April 1, 2000
10
:
431
-
445
;
doi:
10.1101/gr.10.4.431
Abstract
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LETTERS
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Congenic Mapping of the Type 1 Diabetes Locus,
Idd3
, to a 780-kb Region of Mouse Chromosome 3: Identification of a Candidate Segment of Ancestral DNA by Haplotype Mapping
Paul A. Lyons
,
Nicola Armitage
,
Fabio Argentina
,
Paul Denny
,
Natasha J. Hill
,
Christopher J. Lord
,
Mary Beth Wilusz
,
Laurence B. Peterson
,
Linda S. Wicker
,
and
John A. Todd
Genome Res.
April 1, 2000
10
:
446
-
453
;
doi:
10.1101/gr.10.4.446
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Construction of a High-Resolution 2.5-Mb Transcript Map of the Human 6p21.2–6p21.3 Region Immediately Centromeric of the Major Histocompatibility Complex
Nicos Tripodis
,
Sophie Palmer
,
Sam Phillips
,
Sarah Milne
,
Stephan Beck
,
and
Jiannis Ragoussis
Genome Res.
April 1, 2000
10
:
454
-
472
;
doi:
10.1101/gr.10.4.454
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New Target Regions for Human Hypertension via Comparative Genomics
Monika Stoll
,
Anne E. Kwitek-Black
,
Allen W. Cowley, Jr.
,
Eugenie L. Harris
,
Stephen B. Harrap
,
José E. Krieger
,
Morton P. Printz
,
Abraham P. Provoost
,
Jean Sassard
,
and
Howard J. Jacob
Genome Res.
April 1, 2000
10
:
473
-
482
;
doi:
10.1101/gr.10.4.473
Abstract
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Genome Annotation Assessment in
Drosophila melanogaster
Martin G. Reese
,
George Hartzell
,
Nomi L. Harris
,
Uwe Ohler
,
Josep F. Abril
,
and
Suzanna E. Lewis
Genome Res.
April 1, 2000
10
:
483
-
501
;
doi:
10.1101/gr.10.4.483
Abstract
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Supplemental Research Data
METHODS
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MAGPIE
/
EGRET
Annotation of the 2.9-Mb
Drosophila melanogaster Adh
Region
Terry Gaasterland
,
Alexander Sczyrba
,
Elizabeth Thomas
,
Gulriz Aytekin-Kurban
,
Paul Gordon
,
and
Christoph W. Sensen
Genome Res.
April 1, 2000
10
:
502
-
510
;
doi:
10.1101/gr.10.4.502
Abstract
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GeneID
in
Drosophila
Genís Parra
,
Enrique Blanco
,
and
Roderic Guigó
Genome Res.
April 1, 2000
10
:
511
-
515
;
doi:
10.1101/gr.10.4.511
Abstract
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Ab initio Gene Finding in
Drosophila
Genomic DNA
Asaf A. Salamov
and
Victor V. Solovyev
Genome Res.
April 1, 2000
10
:
516
-
522
;
doi:
10.1101/gr.10.4.516
Abstract
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Using Database Matches with
HMMGene
for Automated Gene Detection in
Drosophila
Anders Krogh
Genome Res.
April 1, 2000
10
:
523
-
528
;
doi:
10.1101/gr.10.4.523
Abstract
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Genie
—Gene Finding in
Drosophila melanogaster
Martin G. Reese
,
David Kulp
,
Hari Tammana
,
and
David Haussler
Genome Res.
April 1, 2000
10
:
529
-
538
;
doi:
10.1101/gr.10.4.529
Abstract
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Promoter Prediction on a Genomic Scale—The
Adh
Experience
Uwe Ohler
Genome Res.
April 1, 2000
10
:
539
-
542
;
doi:
10.1101/gr.10.4.539
Abstract
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Drosophila
Genomic Sequence Annotation Using the
BLOCKS+
Database
Jorja G. Henikoff
and
Steven Henikoff
Genome Res.
April 1, 2000
10
:
543
-
546
;
doi:
10.1101/gr.10.4.543
Abstract
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Using
GeneWise
in the
Drosophila
Annotation Experiment
Ewan Birney
and
Richard Durbin
Genome Res.
April 1, 2000
10
:
547
-
548
;
doi:
10.1101/gr.10.4.547
Abstract
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A Microsphere-Based Assay for Multiplexed Single Nucleotide Polymorphism Analysis Using Single Base Chain Extension
Jingwen Chen
,
Marie A. Iannone
,
May-Sung Li
,
J. David Taylor
,
Philip Rivers
,
Anita J. Nelsen
,
Kimberly A. Slentz-Kesler
,
Allen Roses
,
and
Michael P. Weiner
Genome Res.
April 1, 2000
10
:
549
-
557
;
doi:
10.1101/gr.10.4.549
Abstract
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RESOURCES
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Genetic Linkage Mapping of Zebrafish Genes and ESTs
Peter D. Kelly
,
Felicia Chu
,
Ian G. Woods
,
Phuong Ngo-Hazelett
,
Timothy Cardozo
,
Hui Huang
,
Frankie Kimm
,
Lingya Liao
,
Yi-Lin Yan
,
Yingyao Zhou
,
Steven L. Johnson
,
Ruben Abagyan
,
Alexander F. Schier
,
John H. Postlethwait
,
and
William S. Talbot
Genome Res.
April 1, 2000
10
:
558
-
567
;
doi:
10.1101/gr.10.4.558
Abstract
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Supplemental Research Data
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Global Properties of the Metabolic Map of
Escherichia coli
Christos A. Ouzounis
and
Peter D. Karp
Genome Res.
April 1, 2000
10
:
568
-
576
;
doi:
10.1101/gr.10.4.568
Abstract
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PipMaker—A Web Server for Aligning Two Genomic DNA Sequences
Scott Schwartz
,
Zheng Zhang
,
Kelly A. Frazer
,
Arian Smit
,
Cathy Riemer
,
John Bouck
,
Richard Gibbs
,
Ross Hardison
,
and
Webb Miller
Genome Res.
April 1, 2000
10
:
577
-
586
;
doi:
10.1101/gr.10.4.577
Abstract
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April 2000;
10
(4)
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