Table of Contents

April 2000; 10 (4)

INSIGHT/OUTLOOK

  • A Biologist's View of the Drosophila Genome Annotation Assessment Project

    • Michael Ashburner
    Genome Res. April 1, 2000 10: 391-393; doi:10.1101/gr.10.4.391

  • Gene-Finding Approaches for Eukaryotes

    • Gary D. Stormo
    Genome Res. April 1, 2000 10: 394-397; doi:10.1101/gr.10.4.394

  • Powers and Pitfalls in Sequence Analysis: The 70% Hurdle

    • Peer Bork
    Genome Res. April 1, 2000 10: 398-400; doi:10.1101/gr.10.4.398

REVIEW

  • Evolution and Variation of the Yeast (Saccharomyces) Genome

    • Robert K. Mortimer
    Genome Res. April 1, 2000 10: 403-409; doi:10.1101/gr.10.4.403

REPORT

  • Frequent Human Genomic DNA Transduction Driven by LINE-1 Retrotransposition

    • Oxana K. Pickeral,
    • Wojciech Makałowski,
    • Mark S. Boguski,
    • and Jef D. Boeke
    Genome Res. April 1, 2000 10: 411-415; doi:10.1101/gr.10.4.411

ARTICLES

  • Large-Scale Comparison of Fungal Sequence Information: Mechanisms of Innovation in Neurospora crassa and Gene Loss in Saccharomyces cerevisiae

    • Edward L. Braun,
    • Aaron L. Halpern,
    • Mary Anne Nelson,
    • and Donald O. Natvig
    Genome Res. April 1, 2000 10: 416-430; doi:10.1101/gr.10.4.416

  • Systematic Management and Analysis of Yeast Gene Expression Data

    • John Aach,
    • Wayne Rindone,
    • and George M. Church
    Genome Res. April 1, 2000 10: 431-445; doi:10.1101/gr.10.4.431

LETTERS

  • Congenic Mapping of the Type 1 Diabetes Locus, Idd3, to a 780-kb Region of Mouse Chromosome 3: Identification of a Candidate Segment of Ancestral DNA by Haplotype Mapping

    • Paul A. Lyons,
    • Nicola Armitage,
    • Fabio Argentina,
    • Paul Denny,
    • Natasha J. Hill,
    • Christopher J. Lord,
    • Mary Beth Wilusz,
    • Laurence B. Peterson,
    • Linda S. Wicker,
    • and John A. Todd
    Genome Res. April 1, 2000 10: 446-453; doi:10.1101/gr.10.4.446

  • Construction of a High-Resolution 2.5-Mb Transcript Map of the Human 6p21.2–6p21.3 Region Immediately Centromeric of the Major Histocompatibility Complex

    • Nicos Tripodis,
    • Sophie Palmer,
    • Sam Phillips,
    • Sarah Milne,
    • Stephan Beck,
    • and Jiannis Ragoussis
    Genome Res. April 1, 2000 10: 454-472; doi:10.1101/gr.10.4.454

  • New Target Regions for Human Hypertension via Comparative Genomics

    • Monika Stoll,
    • Anne E. Kwitek-Black,
    • Allen W. Cowley, Jr.,
    • Eugenie L. Harris,
    • Stephen B. Harrap,
    • José E. Krieger,
    • Morton P. Printz,
    • Abraham P. Provoost,
    • Jean Sassard,
    • and Howard J. Jacob
    Genome Res. April 1, 2000 10: 473-482; doi:10.1101/gr.10.4.473

  • Genome Annotation Assessment in Drosophila melanogaster

    • Martin G. Reese,
    • George Hartzell,
    • Nomi L. Harris,
    • Uwe Ohler,
    • Josep F. Abril,
    • and Suzanna E. Lewis
    Genome Res. April 1, 2000 10: 483-501; doi:10.1101/gr.10.4.483

METHODS

  • MAGPIE/EGRET Annotation of the 2.9-Mb Drosophila melanogaster Adh Region

    • Terry Gaasterland,
    • Alexander Sczyrba,
    • Elizabeth Thomas,
    • Gulriz Aytekin-Kurban,
    • Paul Gordon,
    • and Christoph W. Sensen
    Genome Res. April 1, 2000 10: 502-510; doi:10.1101/gr.10.4.502

  • GeneID in Drosophila

    • Genís Parra,
    • Enrique Blanco,
    • and Roderic Guigó
    Genome Res. April 1, 2000 10: 511-515; doi:10.1101/gr.10.4.511

  • Ab initio Gene Finding in Drosophila Genomic DNA

    • Asaf A. Salamov and
    • Victor V. Solovyev
    Genome Res. April 1, 2000 10: 516-522; doi:10.1101/gr.10.4.516

  • Using Database Matches with HMMGene for Automated Gene Detection in Drosophila

    • Anders Krogh
    Genome Res. April 1, 2000 10: 523-528; doi:10.1101/gr.10.4.523

  • Genie—Gene Finding in Drosophila melanogaster

    • Martin G. Reese,
    • David Kulp,
    • Hari Tammana,
    • and David Haussler
    Genome Res. April 1, 2000 10: 529-538; doi:10.1101/gr.10.4.529

  • Promoter Prediction on a Genomic Scale—The Adh Experience

    • Uwe Ohler
    Genome Res. April 1, 2000 10: 539-542; doi:10.1101/gr.10.4.539

  • Drosophila Genomic Sequence Annotation Using the BLOCKS+ Database

    • Jorja G. Henikoff and
    • Steven Henikoff
    Genome Res. April 1, 2000 10: 543-546; doi:10.1101/gr.10.4.543

  • Using GeneWise in the Drosophila Annotation Experiment

    • Ewan Birney and
    • Richard Durbin
    Genome Res. April 1, 2000 10: 547-548; doi:10.1101/gr.10.4.547

  • A Microsphere-Based Assay for Multiplexed Single Nucleotide Polymorphism Analysis Using Single Base Chain Extension

    • Jingwen Chen,
    • Marie A. Iannone,
    • May-Sung Li,
    • J. David Taylor,
    • Philip Rivers,
    • Anita J. Nelsen,
    • Kimberly A. Slentz-Kesler,
    • Allen Roses,
    • and Michael P. Weiner
    Genome Res. April 1, 2000 10: 549-557; doi:10.1101/gr.10.4.549

RESOURCES

  • Genetic Linkage Mapping of Zebrafish Genes and ESTs

    • Peter D. Kelly,
    • Felicia Chu,
    • Ian G. Woods,
    • Phuong Ngo-Hazelett,
    • Timothy Cardozo,
    • Hui Huang,
    • Frankie Kimm,
    • Lingya Liao,
    • Yi-Lin Yan,
    • Yingyao Zhou,
    • Steven L. Johnson,
    • Ruben Abagyan,
    • Alexander F. Schier,
    • John H. Postlethwait,
    • and William S. Talbot
    Genome Res. April 1, 2000 10: 558-567; doi:10.1101/gr.10.4.558

  • Global Properties of the Metabolic Map of Escherichia coli

    • Christos A. Ouzounis and
    • Peter D. Karp
    Genome Res. April 1, 2000 10: 568-576; doi:10.1101/gr.10.4.568

  • PipMaker—A Web Server for Aligning Two Genomic DNA Sequences

    • Scott Schwartz,
    • Zheng Zhang,
    • Kelly A. Frazer,
    • Arian Smit,
    • Cathy Riemer,
    • John Bouck,
    • Richard Gibbs,
    • Ross Hardison,
    • and Webb Miller
    Genome Res. April 1, 2000 10: 577-586; doi:10.1101/gr.10.4.577
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This Issue

April 2000; 10 (4)
  1. INSIGHT/OUTLOOK
  2. REVIEW
  3. REPORT
  4. ARTICLES
  5. LETTERS
  6. METHODS
  7. RESOURCES

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