Index by Author

August 2024; 34 (8)
  1. A
  2. B
  3. C
  4. D
  5. E
  6. F
  7. G
  8. H
  9. I
  10. J
  11. K
  12. L
  13. M
  14. N
  15. O
  16. P
  17. Q
  18. R
  19. S
  20. T
  21. U
  22. V
  23. W
  24. X
  25. Y
  26. Z

A

  1. Adelmann, Christopher

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  2. Akil, Huda

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  3. Anderson, Ashlyn G.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  4. Anderson, Sarah N.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  5. Andorf, Carson M.

    • Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize Genome Res. August 2024 34: 1253-1263; Published in Advance September 13, 2024, doi:10.1101/gr.279027.124
      OPEN ACCESS ARTICLE

B

  1. Bashashati, Ali

    • Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries Genome Res. August 2024 34: 1196-1210; Published in Advance August 15, 2024, doi:10.1101/gr.277066.122

  2. Bitzer, Lisa

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  3. Brenner, Thorsten

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  4. Bunney, Blynn G.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  5. Bunney, William E.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

C

  1. Cartagena, Preston M.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  2. Chen, Chien-Yu

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  3. Chen, Pei-Lung

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  4. Chen, Siyuan

    • A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
      OPEN ACCESS ARTICLE

  5. Chuang, Hui-Wen

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  6. Coelho, Susana M.

    • Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage Genome Res. August 2024 34: 1130-1139; Published in Advance August 29, 2024, doi:10.1101/gr.279002.124
      OPEN ACCESS ARTICLE

  7. Collins, Tyler

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  8. Cooper, Gregory M.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

D

  1. Dagan, Tal

    • Colibactin leads to a bacteria-specific mutation pattern and self-inflicted DNA damage Genome Res. August 2024 34: 1154-1164; Published in Advance August 16, 2024, doi:10.1101/gr.279517.124
      OPEN ACCESS ARTICLE

  2. De Clerck, Olivier

    • Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage Genome Res. August 2024 34: 1130-1139; Published in Advance August 29, 2024, doi:10.1101/gr.279002.124
      OPEN ACCESS ARTICLE

  3. Decker, Sebastian O.

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  4. Del Cortona, Andrea

    • Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage Genome Res. August 2024 34: 1130-1139; Published in Advance August 29, 2024, doi:10.1101/gr.279002.124
      OPEN ACCESS ARTICLE

  5. Duchene, Sebastian

    • Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage Genome Res. August 2024 34: 1130-1139; Published in Advance August 29, 2024, doi:10.1101/gr.279002.124
      OPEN ACCESS ARTICLE

F

  1. Farahani, Hossein

    • Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries Genome Res. August 2024 34: 1196-1210; Published in Advance August 15, 2024, doi:10.1101/gr.277066.122

  2. Felker, Stephanie A.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  3. Frith, Martin C.

G

  1. Gao, Xin

    • A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
      OPEN ACCESS ARTICLE

  2. Gent, Jonathan I.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  3. Glanz, Karolina

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  4. Guo, Tingting

    • Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize Genome Res. August 2024 34: 1253-1263; Published in Advance September 13, 2024, doi:10.1101/gr.279027.124
      OPEN ACCESS ARTICLE

H

  1. Hartwig, Christina

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  2. Hirsch, Candice N.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  3. Hsu, Chia-Lang

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  4. Hsu, Jacob Shujui

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  5. Hufford, Matthew B.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  6. Hung, Tsung-Kai

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

J

  1. Jung, Inkyung

    • A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
      OPEN ACCESS ARTICLE

K

  1. Kutalik, Zoltán

L

  1. Lai, Sheng-Kai

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  2. Lawlor, James M.J.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  3. Lee, Yi-Che

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  4. Lepik, Kaido

  5. Li, Xianran

    • Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize Genome Res. August 2024 34: 1253-1263; Published in Advance September 13, 2024, doi:10.1101/gr.279027.124
      OPEN ACCESS ARTICLE

  6. Li, Yu

    • A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
      OPEN ACCESS ARTICLE

  7. Lin, Hong-Ye

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  8. Liska, Orsolya

  9. Liu, Wan-Chi

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  10. Loupe, Jacob M.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  11. Lowry, Emily

    • Colibactin leads to a bacteria-specific mutation pattern and self-inflicted DNA damage Genome Res. August 2024 34: 1154-1164; Published in Advance August 16, 2024, doi:10.1101/gr.279517.124
      OPEN ACCESS ARTICLE

M

  1. Manchanda, Nancy

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  2. Menard, Claire C.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  3. Mendenhall, Eric M.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  4. Mitchell, Amir

    • Colibactin leads to a bacteria-specific mutation pattern and self-inflicted DNA damage Genome Res. August 2024 34: 1154-1164; Published in Advance August 16, 2024, doi:10.1101/gr.279517.124
      OPEN ACCESS ARTICLE

  5. Moyers, Belle A.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  6. Müller, Jan

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  7. Murray, John Isaac

    • A spatiotemporally resolved atlas of mRNA decay in the C. elegans embryo reveals differential regulation of mRNA stability across stages and cell types Genome Res. August 2024 34: 1235-1252; Published in Advance August 14, 2024, doi:10.1101/gr.278980.124

  8. Myers, Richard M.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

N

  1. Nordgren, C. Erik

    • A spatiotemporally resolved atlas of mRNA decay in the C. elegans embryo reveals differential regulation of mRNA stability across stages and cell types Genome Res. August 2024 34: 1235-1252; Published in Advance August 14, 2024, doi:10.1101/gr.278980.124

O

  1. Ou, Shujun

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

P

  1. Papp, Balázs

  2. Peng, Felicia

    • A spatiotemporally resolved atlas of mRNA decay in the C. elegans embryo reveals differential regulation of mRNA stability across stages and cell types Genome Res. August 2024 34: 1235-1252; Published in Advance August 14, 2024, doi:10.1101/gr.278980.124

Q

  1. Qiu, Yinjie

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  2. Qiu, Zhaowen

    • A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
      OPEN ACCESS ARTICLE

R

  1. Rodriguez-Nunez, Ivan

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

S

  1. Schatz, Michael C.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  2. Scheben, Armin

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  3. Scott, R. Wilder

    • Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries Genome Res. August 2024 34: 1196-1210; Published in Advance August 15, 2024, doi:10.1101/gr.277066.122

  4. Seetharam, Arun S.

    • Differences in activity and stability drive transposable element variation in tropical and temperate maize Genome Res. August 2024 34: 1140-1153; Published in Advance September 9, 2024, doi:10.1101/gr.278131.123

  5. Sequeira, Adolfo

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  6. Sohn, Kai

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  7. Sonntag, Mirko

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

T

  1. Tibbs-Cortes, Laura E.

    • Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize Genome Res. August 2024 34: 1253-1263; Published in Advance September 13, 2024, doi:10.1101/gr.279027.124
      OPEN ACCESS ARTICLE

  2. Timasheva, Yanina

U

  1. Underhill, T. Michael

    • Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries Genome Res. August 2024 34: 1196-1210; Published in Advance August 15, 2024, doi:10.1101/gr.277066.122

  2. Uthanumallian, Kavitha

    • Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage Genome Res. August 2024 34: 1130-1139; Published in Advance August 29, 2024, doi:10.1101/gr.279002.124
      OPEN ACCESS ARTICLE

V

  1. Vainshtein, Yevhen

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  2. Verbruggen, Heroen

    • Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage Genome Res. August 2024 34: 1130-1139; Published in Advance August 29, 2024, doi:10.1101/gr.279002.124
      OPEN ACCESS ARTICLE

  3. von Haeseler, Arndt

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

W

  1. Wang, Jiuming

    • A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data Genome Res. August 2024 34: 1174-1184; Published in Advance August 13, 2024, doi:10.1101/gr.279274.124
      OPEN ACCESS ARTICLE

  2. Wang, Yiqing

    • Colibactin leads to a bacteria-specific mutation pattern and self-inflicted DNA damage Genome Res. August 2024 34: 1154-1164; Published in Advance August 16, 2024, doi:10.1101/gr.279517.124
      OPEN ACCESS ARTICLE

  3. Watson, Stanley J.

    • Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs Genome Res. August 2024 34: 1224-1234; Published in Advance August 16, 2024, doi:10.1101/gr.278601.123

  4. Weber, Georg F.

    • A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Genome Res. August 2024 34: 1185-1195; Published in Advance September 13, 2024, doi:10.1101/gr.279326.124
      OPEN ACCESS ARTICLE

  5. Wiens, Matthew

    • Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries Genome Res. August 2024 34: 1196-1210; Published in Advance August 15, 2024, doi:10.1101/gr.277066.122

Y

  1. Yang, Ya-Chien

    • Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies Genome Res. August 2024 34: 1211-1223; Published in Advance September 9, 2024, doi:10.1101/gr.278358.123
      OPEN ACCESS ARTICLE

  2. Yu, Jianming

    • Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize Genome Res. August 2024 34: 1253-1263; Published in Advance September 13, 2024, doi:10.1101/gr.279027.124
      OPEN ACCESS ARTICLE

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