Index by Author

July 2022; 32 (7)
  1. A
  2. B
  3. C
  4. D
  5. E
  6. F
  7. G
  8. H
  9. I
  10. J
  11. K
  12. L
  13. M
  14. N
  15. O
  16. P
  17. Q
  18. R
  19. S
  20. T
  21. U
  22. V
  23. W
  24. X
  25. Y
  26. Z

A

  1. Abad Flores, José David

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  2. Ajjikuttira, Prabha

  3. Alaeitabar, Tina

  4. Alcazar, Rosa

  5. Alvarez, Maria

  6. Arnold, Rachel

  7. Ashby, Cody

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  8. Asnafi, Vahid

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120
    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  9. Avni, Matan

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  10. Ayalew, Mentewab

B

  1. Belhocine, Mohamed

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  2. Berlinguer-Palmini, Rolando

    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  3. Best, Lyle G.

  4. Billon, Victor

  5. Birnbaum, Ramon Y.

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  6. Bodea, Gabriela O.

  7. Bonora, Elena

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  8. Brackley, Chris A.

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  9. Brancati, Francesco

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  10. Buen Abad Najar, Carlos F.

  11. Burra, Prakruthi

C

  1. Cadix, Mandy

  2. Campbell, Michael C.

  3. Carbone, Lucia

  4. Chakraborty, Alina

  5. Chang, Ni-Chen

    • Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression Genome Res. July 2022 32: 1408-1423; Published in Advance January 5, 2022, doi:10.1101/gr.275655.121
      OPEN ACCESS ARTICLE

  6. Charbonnier, Guillaume

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  7. Chasman, Deborah

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  8. Cheetham, Seth W.

  9. Chen, Yujie

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  10. Chowdhury, Kamal

  11. Cieslak, Agata

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120
    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  12. Corcoran, Anne E.

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  13. Cox, Katherine E.L.

D

  1. D'haene, Eva

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  2. Dahan, Idit

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  3. Daulton, Christina

  4. Deng, Youping

  5. Devaux, Alexandre

  6. Dutertre, Martin

E

  1. Easter, Carla

  2. Ewing, Adam D.

F

  1. Faulkner, Geoffrey J.

  2. Fernández-Jaén, Alberto

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  3. Ferrier, Pierre

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  4. Feschotte, Cédric

    • Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression Genome Res. July 2022 32: 1408-1423; Published in Advance January 5, 2022, doi:10.1101/gr.275655.121
      OPEN ACCESS ARTICLE

  5. Fuller, Karla

  6. Fung, Kent T.M.

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

G

  1. Gao, Xiaomeng

    • Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Res. July 2022 32: 1285-1297; Published in Advance July 14, 2022, doi:10.1101/gr.276554.122

  2. Garcia-Perez, Jose L.

  3. Gerdes, Patricia

  4. Gerhardt, Daniel J.

  5. Gestraud, Pierre

  6. Graziano, Claudio

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

H

  1. Hakim, Shazia Tabassum

  2. Hallgrímsson, Benedikt

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  3. Hambleton, Sophie

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  4. Heneman-Masurel, Amélie

  5. Hirsch, Naama

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  6. Hoffman, Ava M.

  7. Hou, Yiran

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

I

  1. Inga, Alberto

J

  1. Jansz, Natasha

  2. Javierre, Biola M.

    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  3. Jia, Yan

    • Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Res. July 2022 32: 1285-1297; Published in Advance July 14, 2022, doi:10.1101/gr.276554.122

K

  1. Karataraki, Nefeli

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  2. Kent, Daniel

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  3. Knaack, Sara

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  4. Kucher, Natalie

L

  1. Labbé, Céline M.

  2. Lareau, Liana F.

  3. Lawson, Heather A.

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  4. Layman, Cora E.

  5. Lee, Andrew

  6. Lee, Hyung Joo

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  7. Lee, Joslynn

  8. Leek, Jeffrey T.

  9. Li, Feifei

    • Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Res. July 2022 32: 1285-1297; Published in Advance July 14, 2022, doi:10.1101/gr.276554.122

  10. Li, Guojun

  11. Li, Xiaoli

    • Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Res. July 2022 32: 1285-1297; Published in Advance July 14, 2022, doi:10.1101/gr.276554.122

M

  1. Maeng, Ju Heon

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  2. Magini, Pamela

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  3. Manosalva, Iris

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  4. Maqbool, Muhammad Ahmad

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  5. Martens, Joost H.A.

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  6. Martineau, Sylvain

  7. Martinez, Edu Suarez

  8. Mathieu, Eve-Lyne

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  9. Meller, Robert

  10. Méndez, Loyda B.

  11. Méndez-González, Miguel P.

  12. Meyer, Thomas J.

  13. Mikulasova, Aneta

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120
    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  14. Morgan, Gareth J.

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  15. Mosher, Stephen

N

  1. Nardone, Anna Maria

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  2. Nevonen, Kimberly A.

  3. Nishiguchi, Michele

P

  1. Prabh, Neel

    • Multiple Pristionchus pacificus genomes reveal distinct evolutionary dynamics between de novo candidates and duplicated genes Genome Res. July 2022 32: 1315-1327; Published in Advance May 26, 2022, doi:10.1101/gr.276431.121

  2. Pradel, Lydie

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  3. Pratap, Siddharth

  4. Puthier, Denis

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

R

  1. Rasmussen, Jay

  2. Relier, Sébastien

  3. Richardson, Sandra R.

  4. Rico, Daniel

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120
    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  5. Rödelsperger, Christian

    • Multiple Pristionchus pacificus genomes reveal distinct evolutionary dynamics between de novo candidates and duplicated genes Genome Res. July 2022 32: 1315-1327; Published in Advance May 26, 2022, doi:10.1101/gr.276431.121

  6. Rolle, Tiffany

  7. Rory, Olson J.

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  8. Rovira, Quirze

    • Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression Genome Res. July 2022 32: 1408-1423; Published in Advance January 5, 2022, doi:10.1101/gr.275655.121
      OPEN ACCESS ARTICLE

  9. Roy, Sourav

  10. Roy, Sushmita

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  11. Russell, Lisa J.

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120
    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

S

  1. Saidi, Rachel

  2. Sanchez-Luque, Francisco J.

  3. Schatz, Michael C.

  4. Schauer, Stephanie N.

  5. Schinke, Carolina

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  6. Schukken, Klaske M.

  7. Seirup, Morten

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  8. Sen, Shurjo K.

  9. Servant, Nicolas

  10. Severi, Giulia

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  11. Shah, Nakul M.

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  12. Sheltzer, Jason M.

  13. Siahpirani, Alireza Fotuhi

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  14. Simonin, Mathieu

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  15. Smith, Charlotte

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

  16. Sniezek, James

  17. Spicuglia, Salvatore

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120
    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  18. Sridharan, Rupa

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  19. Stewart, Ron

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  20. Stunnenberg, Hendrik G.

    • Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes Genome Res. July 2022 32: 1328-1342; Published in Advance June 23, 2021, doi:10.1101/gr.266924.120

T

  1. Tan, Frederick J.

  2. Taricco, Nicolò

  3. Thanendrarajan, Sharmilan

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  4. The Genomic Data Science Community Network

  5. Thomson, James

    • Dynamic regulatory module networks for inference of cell type–specific transcriptional networks Genome Res. July 2022 32: 1367-1384; Published in Advance June 15, 2022, doi:10.1101/gr.276542.121
      OPEN ACCESS ARTICLE

  6. Trevisan-Herraz, Marco

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

V

  1. Vagner, Stéphan

  2. van Rhee, Frits

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  3. Vaquerizas, Juan M.

    • Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression Genome Res. July 2022 32: 1408-1423; Published in Advance January 5, 2022, doi:10.1101/gr.275655.121
      OPEN ACCESS ARTICLE

  4. Vergult, Sarah

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

  5. Vessio, Jennifer

  6. Vidal-García, Marta

    • HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations Genome Res. July 2022 32: 1242-1253; Published in Advance June 16, 2022, doi:10.1101/gr.276196.121
      OPEN ACCESS ARTICLE

W

  1. Walker, Brian A.

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE
    • High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights into proto-oncogene deregulation Genome Res. July 2022 32: 1355-1366; Published in Advance July 21, 2022, doi:10.1101/gr.276028.121
      OPEN ACCESS ARTICLE

  2. Wang, Ting

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  3. Watson, Karriem

  4. Wells, Jonathan

    • Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression Genome Res. July 2022 32: 1408-1423; Published in Advance January 5, 2022, doi:10.1101/gr.275655.121
      OPEN ACCESS ARTICLE

  5. Westbroek, Wendy

  6. Wilcox, Joseph

  7. Wright, Carrie

X

  1. Xie, Xianfa

  2. Xu, Bingxiang

    • Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Res. July 2022 32: 1285-1297; Published in Advance July 14, 2022, doi:10.1101/gr.276554.122

Y

  1. Yaccoby, Shmuel

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  2. Yang, Hongbo

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

  3. Yosef, Nir

  4. Yu, Ting

  5. Yue, Feng

    • Epigenomic analysis reveals prevalent contribution of transposable elements to cis-regulatory elements, tissue-specific expression, and alternative promoters in zebrafish Genome Res. July 2022 32: 1424-1436; Published in Advance June 1, 2022, doi:10.1101/gr.276052.121
      OPEN ACCESS ARTICLE

Z

  1. Zangari, Maurizio

    • Epigenomic translocation of H3K4me3 broad domains over oncogenes following hijacking of super-enhancers Genome Res. July 2022 32: 1343-1354; Published in Advance December 21, 2021, doi:10.1101/gr.276042.121
      OPEN ACCESS ARTICLE

  2. Zhang, Zhihua

    • Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Res. July 2022 32: 1285-1297; Published in Advance July 14, 2022, doi:10.1101/gr.276554.122

  3. Zhao, Xiaoyu

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