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  Differences in the number of de novo mutations between individuals are due to small family-specific effects and stochasticity

  • Jakob M. Goldmann,
  • Juliet E. Hampstead,
  • Wendy S.W. Wong,
  • Amy B. Wilfert,
  • Tychele N. Turner,
  • Marianne A. Jonker,
  • Raphael Bernier,
  • Martijn A. Huynen,
  • Evan E. Eichler,
  • Joris A. Veltman,
  • George L. Maxwell,
  • and Christian Gilissen

  Genome Res. September 2021 31: 1513-1518; Published in Advance July 23, 2021, doi:10.1101/gr.271809.120
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  Parental methylome reprogramming in human uniparental blastocysts reveals germline memory transition

  • Jiawei Xu,
  • Yimin Shu,
  • Guidong Yao,
  • Yu Zhang,
  • Wenbin Niu,
  • Yile Zhang,
  • Xueshan Ma,
  • Haixia Jin,
  • Fuli Zhang,
  • Senlin Shi,
  • Yang Wang,
  • Wenyan Song,
  • Shanjun Dai,
  • Luyao Cheng,
  • Xiangyang Zhang,
  • Wei Xie,
  • Aaron J. Hsueh,
  • and Yingpu Sun

  Genome Res. September 2021 31: 1519-1530; Published in Advance July 30, 2021, doi:10.1101/gr.273318.120
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  Transposable elements and their KZFP controllers are drivers of transcriptional innovation in the developing human brain

  • Christopher J. Playfoot,
  • Julien Duc,
  • Shaoline Sheppard,
  • Sagane Dind,
  • Alexandre Coudray,
  • Evarist Planet,
  • and Didier Trono

  Genome Res. September 2021 31: 1531-1545; Published in Advance August 16, 2021, doi:10.1101/gr.275133.120
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  Ligand-induced native G-quadruplex stabilization impairs transcription initiation

  • Conghui Li,
  • Honghong Wang,
  • Zhinang Yin,
  • Pingping Fang,
  • Ruijing Xiao,
  • Ying Xiang,
  • Wen Wang,
  • Qiuzi Li,
  • Beili Huang,
  • Jian Huang,
  • and Kaiwei Liang

  Genome Res. September 2021 31: 1546-1560; Published in Advance August 16, 2021, doi:10.1101/gr.275431.121
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  Genome-wide variability in recombination activity is associated with meiotic chromatin organization

  • Xiaofan Jin,
  • Geoff Fudenberg,
  • and Katherine S. Pollard

  Genome Res. September 2021 31: 1561-1572; Published in Advance July 23, 2021, doi:10.1101/gr.275358.121
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  The hourglass model of evolutionary conservation during embryogenesis extends to developmental enhancers with signatures of positive selection

  • Jialin Liu,
  • Rebecca R. Viales,
  • Pierre Khoueiry,
  • James P. Reddington,
  • Charles Girardot,
  • Eileen E.M. Furlong,
  • and Marc Robinson-Rechavi

  Genome Res. September 2021 31: 1573-1581; Published in Advance July 15, 2021, doi:10.1101/gr.275212.121
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  Temperature dependence of spontaneous mutation rates

  • Ann-Marie Waldvogel and
  • Markus Pfenninger

  Genome Res. September 2021 31: 1582-1589; Published in Advance July 23, 2021, doi:10.1101/gr.275168.120
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  Single worm transcriptomics identifies a developmental core network of oscillating genes with deep conservation across nematodes

  • Shuai Sun,
  • Christian Rödelsperger,
  • and Ralf J. Sommer

  Genome Res. September 2021 31: 1590-1601; Published in Advance July 22, 2021, doi:10.1101/gr.275303.121
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  Mutability of mononucleotide repeats, not oxidative stress, explains the discrepancy between laboratory-accumulated mutations and the natural allele-frequency spectrum in C. elegans

  • Moein Rajaei,
  • Ayush Shekhar Saxena,
  • Lindsay M. Johnson,
  • Michael C. Snyder,
  • Timothy A. Crombie,
  • Robyn E. Tanny,
  • Erik C. Andersen,
  • Joanna Joyner-Matos,
  • and Charles F. Baer

  Genome Res. September 2021 31: 1602-1613; Published in Advance August 17, 2021, doi:10.1101/gr.275372.121
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  Crossover-active regions of the wheat genome are distinguished by DMC1, the chromosome axis, H3K27me3, and signatures of adaptation

  • Andrew J. Tock,
  • Daniel M. Holland,
  • Wei Jiang,
  • Kim Osman,
  • Eugenio Sanchez-Moran,
  • James D. Higgins,
  • Keith J. Edwards,
  • Cristobal Uauy,
  • F. Chris H. Franklin,
  • and Ian R. Henderson

  Genome Res. September 2021 31: 1614-1628; Published in Advance August 23, 2021, doi:10.1101/gr.273672.120
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