Volume 26, Issue 12 | December 2016

Research
- - High-throughput allele-specific expression across 250 environmental conditions
    Gregory A. Moyerbrailean
    Allison L. Richards
    Daniel Kurtz
    Cynthia A. Kalita
    Gordon O. Davis
    Chris T. Harvey Adnan Alazizi Donovan Watza Yoram Sorokin Nancy Hauff
    ...[+5 authors]...,
    Xiang Zhou
    Xiaoquan Wen
    Roger Pique-Regi
    Francesca Luca
    First Published October 19, 2016
  - Translational plasticity facilitates the accumulation of nonsense genetic variants in the human population
    Sujatha Jagannathan
    Robert K. Bradley
    First Published September 19, 2016
  - The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences
    Cheng Xue
    Muthuswamy Raveendran
    R. Alan Harris
    Gloria L. Fawcett
    Xiaoming Liu
    Simon White Mahmoud Dahdouli David Rio Deiros Jennifer E. Below William Salerno Laura Cox Guoping Fan Betsy Ferguson Julie Horvath Zach Johnson Sree Kanthaswamy H. Michael Kubisch Dahai Liu Michael Platt David G. Smith Binghua Sun Eric J. Vallender Feng Wang Roger W. Wiseman Rui Chen
    ...[+20 authors]...,
    Donna M. Muzny
    Richard A. Gibbs
    Fuli Yu
    Jeffrey Rogers
    First Published October 17, 2016
  - LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans
    Shengjun Tan
    Margarida Cardoso-Moreira
    Wenwen Shi
    Dan Zhang
    Jiawei Huang
    Yanan Mao Hangxing Jia Yaqiong Zhang Chunyan Chen Yi Shao Liang Leng
    ...[+6 authors]...,
    Zhonghua Liu
    Xun Huang
    Manyuan Long
    Yong E. Zhang
    First Published October 20, 2016
  - The evolution of inflorescence diversity in the nightshades and heterochrony during meristem maturation
    Zachary H. Lemmon
    Soon Ju Park
    Ke Jiang
    Joyce Van Eck
    Michael C. Schatz
    First Published November 7, 2016
Methods
- - A privacy-preserving solution for compressed storage and selective retrieval of genomic data
    Zhicong Huang
    Erman Ayday
    Huang Lin
    Raeka S. Aiyar
    Adam Molyneaux
    First Published October 27, 2016
  - An integrated 3-Dimensional Genome Modeling Engine for data-driven simulation of spatial genome organization
    Przemysław Szałaj
    Zhonghui Tang
    Paul Michalski
    Michal J. Pietal
    Oscar J. Luo
    Michał Sadowski
    ...[+1 authors]...,
    Xingwang Li
    Kamen Radew
    Yijun Ruan
    Dariusz Plewczynski
    First Published October 27, 2016
  - Improved assembly of noisy long reads by k-mer validation
    Antonio Bernardo Carvalho
    Eduardo G. Dupim
    Gabriel Goldstein
    First Published October 7, 2016
  - Centrifuge: rapid and sensitive classification of metagenomic sequences
    Daehwan Kim
    Li Song
    Florian P. Breitwieser
    Steven L. Salzberg
    First Published October 17, 2016
Resources
- - Whole-genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver
    Xin Li
    Yun Liu
    Tal Salz
    Kasper D. Hansen
    Andrew Feinberg
    First Published October 13, 2016
  - Multiparameter functional diversity of human C2H2 zinc finger proteins
    Frank W. Schmitges
    Ernest Radovani
    Hamed S. Najafabadi
    Marjan Barazandeh
    Laura F. Campitelli
    Yimeng Yin Arttu Jolma Guoqing Zhong Hongbo Guo Tharsan Kanagalingam Wei F. Dai
    ...[+6 authors]...,
    Jussi Taipale
    Andrew Emili
    Jack F. Greenblatt
    Timothy R. Hughes
    First Published November 16, 2016
  - Genome-wide dynamics of alternative polyadenylation in rice
    Haihui Fu
    Dewei Yang
    Wenyue Su
    Liuyin Ma
    Yingjia Shen
    First Published October 12, 2016
Corrigendum
- - Corrigendum: Replication timing is regulated by the number of MCMs loaded at origins
    Shankar P. Das
    Tyler Borrman
    Victor W.T. Liu
    Scott C.-H. Yang
    John Bechhoefer
    First Published December 1, 2016
Reviewer Index
- - Reviewer Index, Volume 26, 2016
    First Published December 1, 2016

Table of Contents

Volume 26, Issue 12 | December 2016

Research

High-throughput allele-specific expression across 250 environmental conditions

Translational plasticity facilitates the accumulation of nonsense genetic variants in the human population

The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences

LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans

The evolution of inflorescence diversity in the nightshades and heterochrony during meristem maturation

Methods

A privacy-preserving solution for compressed storage and selective retrieval of genomic data

An integrated 3-Dimensional Genome Modeling Engine for data-driven simulation of spatial genome organization

Improved assembly of noisy long reads by k-mer validation

Centrifuge: rapid and sensitive classification of metagenomic sequences

Resources

Whole-genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver

Multiparameter functional diversity of human C2H2 zinc finger proteins

Genome-wide dynamics of alternative polyadenylation in rice

Corrigendum

Corrigendum: Replication timing is regulated by the number of MCMs loaded at origins

Reviewer Index

Reviewer Index, Volume 26, 2016

Table of Contents

Volume 26, Issue 12 | December 2016

Share this issue

Research

Methods

Resources

Corrigendum

Reviewer Index