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  Reprogramming of the human intestinal epigenome by surgical tissue transposition

  • Fides D. Lay,
  • Timothy J. Triche, Jr.,
  • Yvonne C. Tsai,
  • Sheng-Fang Su,
  • Sue Ellen Martin,
  • Siamak Daneshmand,
  • Eila C. Skinner,
  • Gangning Liang,
  • Yoshitomo Chihara,
  • and Peter A. Jones

  Genome Res. April 2014 24: 545-553; Published in Advance February 10, 2014, doi:10.1101/gr.166439.113
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  Genome-wide parent-of-origin DNA methylation analysis reveals the intricacies of human imprinting and suggests a germline methylation-independent mechanism of establishment

  • Franck Court,
  • Chiharu Tayama,
  • Valeria Romanelli,
  • Alex Martin-Trujillo,
  • Isabel Iglesias-Platas,
  • Kohji Okamura,
  • Naoko Sugahara,
  • Carlos Simón,
  • Harry Moore,
  • Julie V. Harness,
  • Hans Keirstead,
  • Jose Vicente Sanchez-Mut,
  • Eisuke Kaneki,
  • Pablo Lapunzina,
  • Hidenobu Soejima,
  • Norio Wake,
  • Manel Esteller,
  • Tsutomu Ogata,
  • Kenichiro Hata,
  • Kazuhiko Nakabayashi,
  • and David Monk

  Genome Res. April 2014 24: 554-569; Published in Advance January 8, 2014, doi:10.1101/gr.164913.113
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  H2A.B facilitates transcription elongation at methylated CpG loci

  • Yibin Chen,
  • Qiang Chen,
  • Richard C. McEachin,
  • James D. Cavalcoli,
  • and Xiaochun Yu

  Genome Res. April 2014 24: 570-579; Published in Advance January 8, 2014, doi:10.1101/gr.156877.113
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  Age-related epigenetic drift in the pathogenesis of MDS and AML

  • Shinji Maegawa,
  • Sheryl M. Gough,
  • Naoko Watanabe-Okochi,
  • Yue Lu,
  • Nianxiang Zhang,
  • Ryan J. Castoro,
  • Marcos R.H. Estecio,
  • Jaroslav Jelinek,
  • Shoudan Liang,
  • Toshio Kitamura,
  • Peter D. Aplan,
  • and Jean-Pierre J. Issa

  Genome Res. April 2014 24: 580-591; Published in Advance January 10, 2014, doi:10.1101/gr.157529.113
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  Restless Legs Syndrome-associated intronic common variant in Meis1 alters enhancer function in the developing telencephalon

  • Derek Spieler,
  • Maria Kaffe,
  • Franziska Knauf,
  • José Bessa,
  • Juan J. Tena,
  • Florian Giesert,
  • Barbara Schormair,
  • Erik Tilch,
  • Heekyoung Lee,
  • Marion Horsch,
  • Darina Czamara,
  • Nazanin Karbalai,
  • Christine von Toerne,
  • Melanie Waldenberger,
  • Christian Gieger,
  • Peter Lichtner,
  • Melina Claussnitzer,
  • Ronald Naumann,
  • Bertram Müller-Myhsok,
  • Miguel Torres,
  • Lillian Garrett,
  • Jan Rozman,
  • Martin Klingenspor,
  • Valérie Gailus-Durner,
  • Helmut Fuchs,
  • Martin Hrabě de Angelis,
  • Johannes Beckers,
  • Sabine M. Hölter,
  • Thomas Meitinger,
  • Stefanie M. Hauck,
  • Helmut Laumen,
  • Wolfgang Wurst,
  • Fernando Casares,
  • Jose Luis Gómez-Skarmeta,
  • and Juliane Winkelmann

  Genome Res. April 2014 24: 592-603; Published in Advance March 18, 2014, doi:10.1101/gr.166751.113
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  Epigenetic modification and inheritance in sexual reversal of fish

  • Changwei Shao,
  • Qiye Li,
  • Songlin Chen,
  • Pei Zhang,
  • Jinmin Lian,
  • Qiaomu Hu,
  • Bing Sun,
  • Lijun Jin,
  • Shanshan Liu,
  • Zongji Wang,
  • Hongmei Zhao,
  • Zonghui Jin,
  • Zhuo Liang,
  • Yangzhen Li,
  • Qiumei Zheng,
  • Yong Zhang,
  • Jun Wang,
  • and Guojie Zhang

  Genome Res. April 2014 24: 604-615; Published in Advance February 2, 2014, doi:10.1101/gr.162172.113
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  Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals

  • Stefan Washietl,
  • Manolis Kellis,
  • and Manuel Garber

  Genome Res. April 2014 24: 616-628; Published in Advance January 15, 2014, doi:10.1101/gr.165035.113
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  A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster

  • Ge Gao,
  • Maria D. Vibranovski,
  • Li Zhang,
  • Zheng Li,
  • Ming Liu,
  • Yong E. Zhang,
  • Xinmin Li,
  • Wenxia Zhang,
  • Qichang Fan,
  • Nicholas W. VanKuren,
  • Manyuan Long,
  • and Liping Wei

  Genome Res. April 2014 24: 629-638; Published in Advance January 9, 2014, doi:10.1101/gr.165837.113
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  Evolutionary conservation of the eumetazoan gene regulatory landscape

  • Michaela Schwaiger,
  • Anna Schönauer,
  • André F. Rendeiro,
  • Carina Pribitzer,
  • Alexandra Schauer,
  • Anna F. Gilles,
  • Johannes B. Schinko,
  • Eduard Renfer,
  • David Fredman,
  • and Ulrich Technau

  Genome Res. April 2014 24: 639-650; Published in Advance March 18, 2014, doi:10.1101/gr.162529.113
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  Cnidarian microRNAs frequently regulate targets by cleavage

  • Yehu Moran,
  • David Fredman,
  • Daniela Praher,
  • Xin Z. Li,
  • Liang Meng Wee,
  • Fabian Rentzsch,
  • Phillip D. Zamore,
  • Ulrich Technau,
  • and Hervé Seitz

  Genome Res. April 2014 24: 651-663; Published in Advance March 18, 2014, doi:10.1101/gr.162503.113
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