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  The mutational spectrum of non-CpG DNA varies with CpG content

  • Jean-Claude Walser and
  • Anthony V. Furano

  Genome Res. July 2010 20: 875-882; Published in Advance May 24, 2010, doi:10.1101/gr.103283.109
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  Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome

  • Robert Shoemaker,
  • Jie Deng,
  • Wei Wang,
  • and Kun Zhang

  Genome Res. July 2010 20: 883-889; Published in Advance April 23, 2010, doi:10.1101/gr.104695.109
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  Sequence features that drive human promoter function and tissue specificity

  • Jane M. Landolin,
  • David S. Johnson,
  • Nathan D. Trinklein,
  • Shelly F. Aldred,
  • Catherine Medina,
  • Hennady Shulha,
  • Zhiping Weng,
  • and Richard M. Myers

  Genome Res. July 2010 20: 890-898; Published in Advance May 25, 2010, doi:10.1101/gr.100370.109
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  Characterization of the RNA content of chromatin

  • Tanmoy Mondal,
  • Markus Rasmussen,
  • Gaurav Kumar Pandey,
  • Anders Isaksson,
  • and Chandrasekhar Kanduri

  Genome Res. July 2010 20: 899-907; Published in Advance April 19, 2010, doi:10.1101/gr.103473.109
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  Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species

  • Phillip A. Morin,
  • Frederick I. Archer,
  • Andrew D. Foote,
  • Julia Vilstrup,
  • Eric E. Allen,
  • Paul Wade,
  • John Durban,
  • Kim Parsons,
  • Robert Pitman,
  • Lewyn Li,
  • Pascal Bouffard,
  • Sandra C. Abel Nielsen,
  • Morten Rasmussen,
  • Eske Willerslev,
  • M. Thomas P. Gilbert,
  • and Timothy Harkins

  Genome Res. July 2010 20: 908-916; Published in Advance April 22, 2010, doi:10.1101/gr.102954.109
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  Evolution of a genomic regulatory domain: The role of gene co-option and gene duplication in the Enhancer of split complex

  • Elizabeth J. Duncan and
  • Peter K. Dearden

  Genome Res. July 2010 20: 917-928; Published in Advance May 10, 2010, doi:10.1101/gr.104794.109
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  Genome-wide gene expression regulation as a function of genotype and age in C. elegans

  • Ana Viñuela,
  • L. Basten Snoek,
  • Joost A.G. Riksen,
  • and Jan E. Kammenga

  Genome Res. July 2010 20: 929-937; Published in Advance May 20, 2010, doi:10.1101/gr.102160.109
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  Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

  • Daniel E. Neafsey,
  • Bridget M. Barker,
  • Thomas J. Sharpton,
  • Jason E. Stajich,
  • Daniel J. Park,
  • Emily Whiston,
  • Chiung-Yu Hung,
  • Cody McMahan,
  • Jared White,
  • Sean Sykes,
  • David Heiman,
  • Sarah Young,
  • Qiandong Zeng,
  • Amr Abouelleil,
  • Lynne Aftuck,
  • Daniel Bessette,
  • Adam Brown,
  • Michael FitzGerald,
  • Annie Lui,
  • J. Pendexter Macdonald,
  • Margaret Priest,
  • Marc J. Orbach,
  • John N. Galgiani,
  • Theo N. Kirkland,
  • Garry T. Cole,
  • Bruce W. Birren,
  • Matthew R. Henn,
  • John W. Taylor,
  • and Steven D. Rounsley

  Genome Res. July 2010 20: 938-946; Published in Advance June 1, 2010, doi:10.1101/gr.103911.109
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  A global network of coexisting microbes from environmental and whole-genome sequence data

  • Samuel Chaffron,
  • Hubert Rehrauer,
  • Jakob Pernthaler,
  • and Christian von Mering

  Genome Res. July 2010 20: 947-959; Published in Advance May 10, 2010, doi:10.1101/gr.104521.109
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