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  Chromodomains direct integration of retrotransposons to heterochromatin

  • Xiang Gao,
  • Yi Hou,
  • Hirotaka Ebina,
  • Henry L. Levin,
  • and Daniel F. Voytas

  Genome Res. March 2008 18: 359-369; Published in Advance February 6, 2008, doi:10.1101/gr.7146408
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  Segmental duplications and evolutionary plasticity at tumor chromosome break-prone regions

  • Eva Darai-Ramqvist,
  • Agneta Sandlund,
  • Stefan Müller,
  • George Klein,
  • Stefan Imreh,
  • and Maria Kost-Alimova

  Genome Res. March 2008 18: 370-379; Published in Advance January 29, 2008, doi:10.1101/gr.7010208
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  Whole-genome maps of USF1 and USF2 binding and histone H3 acetylation reveal new aspects of promoter structure and candidate genes for common human disorders

  • Alvaro Rada-Iglesias,
  • Adam Ameur,
  • Philipp Kapranov,
  • Stefan Enroth,
  • Jan Komorowski,
  • Thomas R. Gingeras,
  • and Claes Wadelius

  Genome Res. March 2008 18: 380-392; Published in Advance January 29, 2008, doi:10.1101/gr.6880908
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  Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson,
  • Wei Li,
  • D. Benjamin Gordon,
  • Arindam Bhattacharjee,
  • Bo Curry,
  • Jayati Ghosh,
  • Leonardo Brizuela,
  • Jason S. Carroll,
  • Myles Brown,
  • Paul Flicek,
  • Christoph M. Koch,
  • Ian Dunham,
  • Mark Bieda,
  • Xiaoqin Xu,
  • Peggy J. Farnham,
  • Philipp Kapranov,
  • David A. Nix,
  • Thomas R. Gingeras,
  • Xinmin Zhang,
  • Heather Holster,
  • Nan Jiang,
  • Roland D. Green,
  • Jun S. Song,
  • Scott A. McCuine,
  • Elizabeth Anton,
  • Loan Nguyen,
  • Nathan D. Trinklein,
  • Zhen Ye,
  • Keith Ching,
  • David Hawkins,
  • Bing Ren,
  • Peter C. Scacheri,
  • Joel Rozowsky,
  • Alexander Karpikov,
  • Ghia Euskirchen,
  • Sherman Weissman,
  • Mark Gerstein,
  • Michael Snyder,
  • Annie Yang,
  • Zarmik Moqtaderi,
  • Heather Hirsch,
  • Hennady P. Shulha,
  • Yutao Fu,
  • Zhiping Weng,
  • Kevin Struhl,
  • Richard M. Myers,
  • Jason D. Lieb,
  • and X. Shirley Liu

  Genome Res. March 2008 18: 393-403; Published in Advance February 7, 2008, doi:10.1101/gr.7080508
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  MicroRNA–target pairs in the rat kidney identified by microRNA microarray, proteomic, and bioinformatic analysis

  • Zhongmin Tian,
  • Andrew S. Greene,
  • Jennifer L. Pietrusz,
  • Isaac R. Matus,
  • and Mingyu Liang

  Genome Res. March 2008 18: 404-411; Published in Advance January 29, 2008, doi:10.1101/gr.6587008
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  Evolutionary dynamics of nematode operons: Easy come, slow go

  • Wenfeng Qian and
  • Jianzhi Zhang

  Genome Res. March 2008 18: 412-421; Published in Advance January 24, 2008, doi:10.1101/gr.7112608
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  Genome structure and emerging evidence of an incipient sex chromosome in Populus

  • Tongming Yin,
  • Stephen P. DiFazio,
  • Lee E. Gunter,
  • Xinye Zhang,
  • Michell M. Sewell,
  • Scott A. Woolbright,
  • Gery J. Allan,
  • Collin T. Kelleher,
  • Carl J. Douglas,
  • Mingxiu Wang,
  • and Gerald A. Tuskan

  Genome Res. March 2008 18: 422-430; Published in Advance February 6, 2008, doi:10.1101/gr.7076308
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  Multigenome analysis identifies a worldwide distributed epidemic Legionella pneumophila clone that emerged within a highly diverse species

  • Christel Cazalet,
  • Sophie Jarraud,
  • Yad Ghavi-Helm,
  • Frank Kunst,
  • Philippe Glaser,
  • Jerome Etienne,
  • and Carmen Buchrieser

  Genome Res. March 2008 18: 431-441; Published in Advance February 6, 2008, doi:10.1101/gr.7229808
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  The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota

  • Tomoyuki Kosaka,
  • Souichiro Kato,
  • Takefumi Shimoyama,
  • Shunichi Ishii,
  • Takashi Abe,
  • and Kazuya Watanabe

  Genome Res. March 2008 18: 442-448; Published in Advance January 24, 2008, doi:10.1101/gr.7136508
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  Evolution of protein domain promiscuity in eukaryotes

  • Malay Kumar Basu,
  • Liran Carmel,
  • Igor B. Rogozin,
  • and Eugene V. Koonin

  Genome Res. March 2008 18: 449-461; Published in Advance January 29, 2008, doi:10.1101/gr.6943508
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  Coevolution of gene families in prokaryotes

  • Otto X. Cordero,
  • Berend Snel,
  • and Paulien Hogeweg

  Genome Res. March 2008 18: 462-468; Published in Advance January 29, 2008, doi:10.1101/gr.6815508
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