Your search for returned 6,440 results
Research
Vertebrates show coordinated elevated expression of mitochondrial and nuclear genes after birth
- First Published March 4, 2025
Research
Spirodela polyrhiza" > Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza
- First Published March 4, 2025
Perspective
Notable challenges posed by long-read sequencing for the study of transcriptional diversity and genome annotation
- First Published March 3, 2025
Method
Quality assessment of long read data in multisample lrRNA-seq experiments using SQANTI-reads
- First Published March 3, 2025
Research
Estrogen-induced chromatin looping changes identify a subset of functional regulatory elements
- First Published March 3, 2025
Research
A prospective trial comparing programmable targeted long-read sequencing and short-read genome sequencing for genetic diagnosis of cerebellar ataxia
- First Published February 27, 2025
Resource
Exploring the epigenome profiles of repetitive elements with the WashU Repeat Browser
- First Published February 21, 2025
Research
The genomic consequences and persistence of sociality in spiders
- First Published February 20, 2025
Research
Long-read single-cell RNA sequencing enables the study of cancer subclone-specific genotypes and phenotypes in chronic lymphocytic leukemia
- First Published February 18, 2025
Research
Transcriptomic and proteomic effects of gene deletion are not evolutionarily conserved
- First Published February 18, 2025
Research
Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection
- First Published February 14, 2025
Research
Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes
- First Published February 14, 2025
Research
Genetic regulation of nascent RNA maturation revealed by direct RNA nanopore sequencing
- First Published February 14, 2025
Research
Nucleosome binding by TP53, TP63, and TP73 is determined by the composition, accessibility, and helical orientation of their binding sites
- First Published February 10, 2025
Research
Variation in the fitness impact of translationally optimal codons among animals
- First Published February 10, 2025
Method
Kernel-bounded clustering for spatial transcriptomics enables scalable discovery of complex spatial domains
- First Published February 5, 2025
Mini-Review
The additional diagnostic yield of long-read sequencing in undiagnosed rare diseases
- First Published February 3, 2025
Review
k-mer approaches for biodiversity genomics" > k-mer approaches for biodiversity genomics
- First Published January 31, 2025
Method
Enhancing nanopore adaptive sampling for PromethION using readfish at scale
- First Published January 30, 2025
Method
Rapid and accurate demultiplexing of direct RNA nanopore sequencing data with SeqTagger
- First Published January 29, 2025
Review
Artificial intelligence and machine learning in cell-free-DNA-based diagnostics
- First Published January 22, 2025
Resource
Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution
- First Published January 14, 2025
Research
Characterization of the role of spatial proximity of DNA double-strand breaks in the formation of CRISPR-Cas9-induced large structural variations
- First Published January 13, 2025
Method
Interactive visualization and interpretation of pangenome graphs by linear reference–based coordinate projection and annotation integration
- First Published January 13, 2025
Method
Nanopore-based consensus sequencing enables accurate multimodal tumor cell-free DNA profiling
- First Published January 13, 2025
Method
Single-cell Rapid Capture Hybridization sequencing reliably detects isoform usage and coding mutations in targeted genes
- First Published January 10, 2025
Research
DDX3X and DDX3Y" > Post-transcriptional cross- and auto-regulation buffer expression of the human RNA helicases DDX3X and DDX3Y
- First Published January 10, 2025
Research
Timescale and genetic linkage explain the variable impact of defense systems on horizontal gene transfer
- First Published January 10, 2025
Method
Proxy panels enable privacy-aware outsourcing of genotype imputation
- First Published January 10, 2025
Research
Hierarchical architecture of neo-sex chromosomes and accelerated adaptive evolution in tortricid moths
- First Published January 6, 2025
Research
Fusion, fission, and scrambling of the bilaterian genome in Bryozoa
- First Published January 6, 2025
Method
Identification of the shortest species-specific oligonucleotide sequences
- First Published January 2, 2025
Method
Combining DNA and protein alignments to improve genome annotation with LiftOn
- First Published December 27, 2024
Method
Probing the eukaryotic microbes of ruminants with a deep-learning classifier and comprehensive protein databases
- First Published December 27, 2024
Method
Evaluation of strategies for evidence-driven genome annotation using long-read RNA-seq
- First Published December 23, 2024
Research
CRX retinopathy models" > Aberrant homeodomain–DNA cooperative dimerization underlies distinct developmental defects in two dominant CRX retinopathy models
- First Published December 23, 2024
Method
Diffusion-based generation of gene regulatory networks from scRNA-seq data with DigNet
- First Published December 18, 2024
Method
MCHelper automatically curates transposable element libraries across eukaryotic species
- First Published December 9, 2024
Method
Resolving the chromatin impact of mosaic variants with targeted Fiber-seq
- First Published December 9, 2024
Research
Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation
- First Published December 5, 2024
Resource
An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes
- First Published December 5, 2024
Research
Arabidopsis thaliana" > Characterization of DNA methylation reader proteins in Arabidopsis thaliana
- First Published December 4, 2024
Method
Structure-optimized sgRNA selection with PlatinumCRISPr for efficient Cas9 generation of knockouts
- First Published December 3, 2024