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PERSPECTIVE

Genome annotation past, present, and future: How to define an ORF at each locus

Michael R. Brent

First Published December 8, 2005

Dog Special/Letters

Hotspots of mutation and breakage in dog and human chromosomes

Caleb Webber
Chris P. Ponting

First Published December 8, 2005

PERSPECTIVE

Xenomics

Enrique Amaya

First Published December 8, 2005

PERSPECTIVE

Changing perspectives in yeast research nearly a decade after the genome sequence

Kara Dolinski
David Botstein

First Published December 8, 2005

PERSPECTIVE

Drosophila melanogaster: A case study of a model genomic sequence and its consequences" > Drosophila melanogaster: A case study of a model genomic sequence and its consequences

Michael Ashburner
Casey M. Bergman

First Published December 8, 2005

PERSPECTIVE

Ciona intestinalis" > Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis

Weiyang Shi
Michael Levine
Brad Davidson

First Published December 8, 2005

PERSPECTIVE

Arabidopsis genome: A foundation for plant research" > The Arabidopsis genome: A foundation for plant research

Michael Bevan
Sean Walsh

First Published December 8, 2005

PERSPECTIVE

Grains of knowledge: Genomics of model cereals

Andrew H. Paterson
Michael Freeling
Takuji Sasaki

First Published December 8, 2005

PERSPECTIVE

The mouse genome

Jean Louis Guénet

First Published December 8, 2005

Dog Special/Resources

Construction of a 2-Mb resolution BAC microarray for CGH analysis of canine tumors

Rachael Thomas
Allyson Scott
Cordelia F. Langford
Susan P. Fosmire
Cristan M. Jubala
Travis D. Lorentzen Christophe Hitte Elinor K. Karlsson Ewen Kirkness Elaine A. Ostrander
... [+5 authors] ...,
Francis Galibert
Kerstin Lindblad-Toh
Jaime F. Modiano
Matthew Breen

First Published December 8, 2005

Dog Special/Letters

Short interspersed elements (SINEs) are a major source of canine genomic diversity

Wei Wang
Ewen F. Kirkness

First Published December 8, 2005

PERSPECTIVE

The canine genome

Elaine A. Ostrander
Robert K. Wayne

First Published December 8, 2005

Preface

Genome Research celebrated" > A decade of Genome Research celebrated

Hillary E. Sussman

First Published December 8, 2005

PERSPECTIVE

Advances in livestock genomics: Opening the barn door

James E. Womack

First Published December 8, 2005

PERSPECTIVE

Fish genomics and biology

Hugues Roest Crollius
Jean Weissenbach

First Published December 8, 2005

Dog Special/Letters

Selective sweep mapping of genes with large phenotypic effects

John P. Pollinger
Carlos D. Bustamante
Adi Fledel-Alon
Sheila Schmutz
Melissa M. Gray
Robert K. Wayne

First Published December 8, 2005

PERSPECTIVE

Comparing the human and chimpanzee genomes: Searching for needles in a haystack

Ajit Varki
Tasha K. Altheide

First Published December 8, 2005

PERSPECTIVE

Insights on biology and evolution from microbial genome sequencing

Claire M. Fraser-Liggett

First Published December 8, 2005

PERSPECTIVE

Genomics of the fungal kingdom: Insights into eukaryotic biology

James E. Galagan
Matthew R. Henn
Li-Jun Ma
Christina A. Cuomo
Bruce Birren

First Published December 8, 2005

Dog Special/Letters

Interaction between the X chromosome and an autosome regulates size sexual dimorphism in Portuguese Water Dogs

Kevin Chase
David R. Carrier
Frederick R. Adler
Elaine A. Ostrander
Karl G. Lark

First Published December 8, 2005

PERSPECTIVE

Chicken genome: Current status and future opportunities

David W. Burt

First Published December 8, 2005

PERSPECTIVE

Genomics of the future: Identification of quantitative trait loci in the mouse

Lorraine Flaherty
Bruce Herron
Derek Symula

First Published December 8, 2005

Dog Special/Letters

Genetics of canid skeletal variation: Size and shape of the pelvis

David R. Carrier
Kevin Chase
Karl G. Lark

First Published December 8, 2005

PERSPECTIVE

C. elegans: So many genes, such a little worm" > Genomics in C. elegans: So many genes, such a little worm

LaDeana W. Hillier
Alan Coulson
John I. Murray
Zhirong Bao
John E. Sulston
Robert H. Waterston

First Published December 8, 2005

LETTER

Uneven distribution of expressed sequence tag loci on maize pachytene chromosomes

Lorinda K. Anderson
Ann Lai
Stephen M. Stack
Carene Rizzon
Brandon S. Gaut

First Published December 7, 2005

Methods

Survey of allelic expression using EST mining

Bing Ge
Scott Gurd
Tiffany Gaudin
Carole Dore
Pierre Lepage
Eef Harmsen
Thomas J. Hudson
Tomi Pastinen

First Published October 26, 2005

LETTER

Large-scale recombination rate patterns are conserved among human populations

David Serre
Robert Nadon
Thomas J. Hudson

First Published October 26, 2005

LETTER

Genomic regions exhibiting positive selection identified from dense genotype data

Christopher S. Carlson
Daryl J. Thomas
Michael A. Eberle
Johanna E. Swanson
Robert J. Livingston
Mark J. Rieder
Deborah A. Nickerson

First Published October 26, 2005

LETTER

Genetically indistinguishable SNPs and their influence on inferring the location of disease-associated variants

Robert Lawrence
David M. Evans
Andrew P. Morris
Xiayi Ke
Sarah Hunt
Marta Paolucci
... [+1 authors] ...,
Jiannis Ragoussis
Panos Deloukas
David Bentley
Lon R. Cardon

First Published October 26, 2005

LETTER

Ascertainment bias in studies of human genome-wide polymorphism

Andrew G. Clark
Melissa J. Hubisz
Carlos D. Bustamante
Scott H. Williamson
Rasmus Nielsen

First Published October 26, 2005

ARTICLE

SPANX gene cluster mapped to the prostate cancer susceptibility locus HPCX at Xq27" > Dynamic structure of the SPANX gene cluster mapped to the prostate cancer susceptibility locus HPCX at Xq27

Natalay Kouprina
Adam Pavlicek
Vladimir N. Noskov
Greg Solomon
John Otstot
William Isaacs John D. Carpten Jeffrey M. Trent
... [+3 authors] ...,
Joanna Schleutker
J. Carl Barrett
Jerzy Jurka
Vladimir Larionov

First Published October 26, 2005

Methods

Genomic scans for selective sweeps using SNP data

Rasmus Nielsen
Scott Williamson
Yuseob Kim
Melissa J. Hubisz
Andrew G. Clark
Carlos Bustamante

First Published October 26, 2005

LETTER

Segmental duplications and gene conversion: Human luteinizing hormone/chorionic gonadotropin β gene cluster

Pille Hallast
Liina Nagirnaja
Tõnu Margus
Maris Laan

First Published October 26, 2005

LETTER

Genome-wide definitive haplotypes determined using a collection of complete hydatidiform moles

Yoji Kukita
Katsuyuki Miyatake
Renee Stokowski
David Hinds
Koichiro Higasa
Norio Wake Toshio Hirakawa Hidenori Kato Takao Matsuda
... [+4 authors] ...,
Krishna Pant
David Cox
Tomoko Tahira
Kenshi Hayashi

First Published October 26, 2005

PERSPECTIVE

Determinants of the success of whole-genome association testing

Andrew G. Clark
Eric Boerwinkle
James Hixson
Charles F. Sing

First Published October 26, 2005

RESOURCE

The International HapMap Project Web site

Gudmundur A. Thorisson
Albert V. Smith
Lalitha Krishnan
Lincoln D. Stein

First Published October 26, 2005

RESOURCE

Inference and analysis of haplotypes from combined genotyping studies deposited in dbSNP

Noah A. Zaitlen
Hyun Min Kang
Michael L. Feolo
Stephen T. Sherry
Eran Halperin
Eleazar Eskin

First Published October 26, 2005

LETTER

Sequence features in regions of weak and strong linkage disequilibrium

Albert V. Smith
Daryl J. Thomas
Heather M. Munro
Gonçalo R. Abecasis

First Published October 26, 2005

Methods

Calibrating a coalescent simulation of human genome sequence variation

Stephen F. Schaffner
Catherine Foo
Stacey Gabriel
David Reich
Mark J. Daly
David Altshuler

First Published October 26, 2005

ARTICLE

Measures of human population structure show heterogeneity among genomic regions

Bruce S. Weir
Lon R. Cardon
Amy D. Anderson
Dahlia M. Nielsen
William G. Hill

First Published October 26, 2005

ARTICLE

Traffic of genetic information between segmental duplications flanking the typical 22q11.2 deletion in velo-cardio-facial syndrome/DiGeorge syndrome

Pavlicek Adam
House Reniqua
Gentles Andrew J.
Jurka Jerzy
Morrow Bernice E.

First Published October 26, 2005

LETTER

Evolutionary constraints in conserved nongenic sequences of mammals

Peter D. Keightley
Gregory V. Kryukov
Shamil Sunyaev
Daniel L. Halligan
Daniel J. Gaffney

First Published October 3, 2005

LETTER

Saccharomyces cerevisiae" > Identification of programmed translational -1 frameshifting sites in the genome of Saccharomyces cerevisiae

Michaël Bekaert
Hugues Richard
Bernard Prum
Jean-Pierre Rousset

First Published October 3, 2005

LETTER

Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels

Martin Bengtsson
Anders Ståhlberg
Patrik Rorsman
Mikael Kubista

First Published October 3, 2005

LETTER

Escherichia coli lead to convergent growth phenotypes with different gene expression states" > Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states

Stephen S. Fong
Andrew R. Joyce
Bernhard Ø. Palsson

First Published October 3, 2005

Methods

Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries

John Emberton
Jianxin Ma
Yinan Yuan
Phillip SanMiguel
Jeffrey L. Bennetzen

First Published October 3, 2005

LETTER

Differential methylation of genes and repeats in land plants

Pablo D. Rabinowicz
Robert Citek
Muhammad A. Budiman
Andrew Nunberg
Joseph A. Bedell
Nathan Lakey
... [+1 authors] ...,
Andrew L. O'Shaughnessy
Lidia U. Nascimento
W. Richard McCombie
Robert A. Martienssen

First Published October 3, 2005

LETTER

Saccharomyces cerevisiae" > Metabolic functions of duplicate genes in Saccharomyces cerevisiae

Lars Kuepfer
Uwe Sauer
Lars M. Blank

First Published October 3, 2005

LETTER

C. elegans" > The function and expansion of the Patched- and Hedgehog-related homologs in C. elegans

Olivier Zugasti
Jeena Rajan
Patricia E. Kuwabara

First Published October 3, 2005

LETTER

Igf2r and Air promoters share cis-regulatory elements" > Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements

Florian M. Pauler
Stefan H. Stricker
Katarzyna E. Warczok
Denise P. Barlow

First Published October 3, 2005

LETTER

Drosophila" > Sex chromosome evolution: Molecular aspects of Y-chromosome degeneration in Drosophila

Doris Bachtrog

First Published September 16, 2005

RESOURCE

The Yeast Gene Order Browser: Combining curated homology and syntenic context reveals gene fate in polyploid species

Kevin P. Byrne
Kenneth H. Wolfe

First Published September 16, 2005

LETTER

Mycobacterium tuberculosis Beijing genotype: Clues from human phylogeography" > Origin and primary dispersal of the Mycobacterium tuberculosis Beijing genotype: Clues from human phylogeography

Igor Mokrousov
Ho Minh Ly
Tatiana Otten
Nguyen Ngoc Lan
Boris Vyshnevskyi
Sven Hoffner
Olga Narvskaya

First Published September 16, 2005

ARTICLE

Natronomonas pharaonis" > Living with two extremes: Conclusions from the genome sequence of Natronomonas pharaonis

Michaela Falb
Friedhelm Pfeiffer
Peter Palm
Karin Rodewald
Volker Hickmann
Jörg Tittor
Dieter Oesterhelt

First Published September 16, 2005

ARTICLE

De novo discovery of a tissue-specific gene regulatory module in a chordate

David S. Johnson
Qing Zhou
Kasumi Yagi
Nori Satoh
Wing Wong
Arend Sidow

First Published September 16, 2005

RESOURCE

Galaxy: A platform for interactive large-scale genome analysis

Belinda Giardine
Cathy Riemer
Ross C. Hardison
Richard Burhans
Laura Elnitski
Prachi Shah Yi Zhang Daniel Blankenberg Istvan Albert
... [+4 authors] ...,
James Taylor
Webb Miller
W. James Kent
Anton Nekrutenko

First Published September 16, 2005

ARTICLE

Pseudoalteromonas haloplanktis TAC125" > Coping with cold: The genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125

Claudine Médigue
Evelyne Krin
Géraldine Pascal
Valérie Barbe
Andreas Bernsel
Philippe N. Bertin Frankie Cheung Stéphane Cruveiller Salvino D'Amico Angela Duilio Gang Fang Georges Feller Christine Ho Sophie Mangenot Gennaro Marino Johan Nilsson Ermenegilda Parrilli Eduardo P.C. Rocha Zoé Rouy Agnieszka Sekowska
... [+15 authors] ...,
Maria Luisa Tutino
David Vallenet
Gunnar von Heijne
Antoine Danchin

First Published September 16, 2005

Methods

Simple, robust methods for high-throughput nanoliter-scale DNA sequencing

Duane E. Smailus
Andre Marziali
Philip Dextras
Marco A. Marra
Robert A. Holt

First Published September 16, 2005

LETTER

A genome-wide survey of structural variation between human and chimpanzee

Tera L. Newman
Eray Tuzun
V. Anne Morrison
Karen E. Hayden
Mario Ventura
Sean D. McGrath
Mariano Rocchi
Evan E. Eichler

First Published September 16, 2005

LETTER

The evolutionary fate of MULE-mediated duplications of host gene fragments in rice

Nikoleta Juretic
Douglas R. Hoen
Michael L. Huynh
Paul M. Harrison
Thomas E. Bureau

First Published September 1, 2005

LETTER

Arabidopsis" > A microarray analysis of the rice transcriptome and its comparison to Arabidopsis

Ligeng Ma
Chen Chen
Xigang Liu
Yuling Jiao
Ning Su
Lin Li Xiangfeng Wang Mengliang Cao Ning Sun Xiuqing Zhang Jingyue Bao Jian Li Soren Pedersen Lars Bolund Hongyu Zhao Longping Yuan
... [+11 authors] ...,
Gane Ka-Shu Wong
Jun Wang
Xing Wang Deng
Jian Wang

First Published September 1, 2005

LETTER

Fitting background-selection predictions to levels of nucleotide variation and divergence along the human autosomes

Floyd A. Reed
Joshua M. Akey
Charles F. Aquadro

First Published September 1, 2005

LETTER

Ancient haplotypes of the HLA Class II region

Christopher K. Raymond
Arnold Kas
Marcia Paddock
Ruolan Qiu
Yang Zhou
Sandhya Subramanian Jean Chang
... [+2 authors] ...,
Anthony Palmieri
Eric Haugen
Rajinder Kaul
Maynard V. Olson

First Published September 1, 2005

LETTER

Independent intrachromosomal recombination events underlie the pericentric inversions of chimpanzee and gorilla chromosomes homologous to human chromosome 16

Violaine Goidts
Justyna M. Szamalek
Pieter J. de Jong
David N. Cooper
Nadia Chuzhanova
Horst Hameister
Hildegard Kehrer-Sawatzki

First Published September 1, 2005

LETTER

Why do human diversity levels vary at a megabase scale?

Ines Hellmann
Kay Prüfer
Hongkai Ji
Michael C. Zody
Svante Pääbo
Susan E. Ptak

First Published September 1, 2005

LETTER

Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates

Louie N. van de Lagemaat
Liane Gagnier
Patrik Medstrand
Dixie L. Mager

First Published September 1, 2005

ARTICLE

Evolutionary mechanisms shaping the genomic structure of the Williams-Beuren syndrome chromosomal region at human 7q11.23

Anna Antonell
Oscar de Luis
Xavier Domingo-Roura
Luis Alberto Pérez-Jurado

First Published September 1, 2005

LETTER

Drosophila: Developmental plasticity and genomic targeting signals" > Genome-wide HP1 binding in Drosophila: Developmental plasticity and genomic targeting signals

Elzo de Wit
Frauke Greil
Bas van Steensel

First Published August 18, 2005

Methods

Saccharomyces cerevisiae" > A network of transcriptionally coordinated functional modules in Saccharomyces cerevisiae

Allegra A. Petti
George M. Church

First Published August 18, 2005

LETTER

Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species

First Published August 18, 2005

ARTICLE

ATG deserts define a novel core promoter subclass

Maxwell P. Lee
Kevin Howcroft
Aparna Kotekar
Howard H. Yang
Kenneth H. Buetow
Dinah S. Singer

First Published August 18, 2005

ARTICLE

Gossypium and Arabidopsis: Unraveling the consequences of both ancient and recent polyploidy" > Comparative genomics of Gossypium and Arabidopsis: Unraveling the consequences of both ancient and recent polyploidy

Junkang Rong
John E. Bowers
Stefan R. Schulze
Vijay N. Waghmare
Carl J. Rogers
Gary J. Pierce
Hua Zhang
James C. Estill
Andrew H. Paterson

First Published August 18, 2005

LETTER

Origin and evolution of new exons in rodents

Wen Wang
Hongkun Zheng
Shuang Yang
Haijing Yu
Jun Li
Huifeng Jiang Jianning Su Lei Yang Jianguo Zhang Jason McDermott Ram Samudrala Jian Wang Huanming Yang
... [+8 authors] ...,
Jun Yu
Karsten Kristiansen
Gane Ka-Shu Wong
Jun Wang

First Published August 18, 2005

RESOURCE

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods
Catherine Wilson
Brian Friedlander
Patricia Chang
Daengnoy K. Reyes
Rebecca Nix
... [+1 authors] ...,
Peter D. Kelly
Felicia Chu
John H. Postlethwait
William S. Talbot

First Published August 18, 2005

LETTER

An extraordinary retrotransposon family encoding dual endonucleases

Kenji K. Kojima
Haruhiko Fujiwara

First Published August 2, 2005

Methods

Ciona savignyi" > Assembly of polymorphic genomes: Algorithms and application to Ciona savignyi

Jade P. Vinson
David B. Jaffe
Keith O'Neill
Elinor K. Karlsson
Nicole Stange-Thomann
Scott Anderson Jill P. Mesirov Nori Satoh Yutaka Satou
... [+4 authors] ...,
Chad Nusbaum
Bruce Birren
James E. Galagan
Eric S. Lander

First Published August 2, 2005

LETTER

M. smegmatis proteome: Protein expression levels correlate with function, operons, and codon bias" > Mass spectrometry of the M. smegmatis proteome: Protein expression levels correlate with function, operons, and codon bias

Rong Wang
John T. Prince
Edward M. Marcotte

First Published August 2, 2005

Methods

Region-specific detection of neuroblastoma loss of heterozygosity at multiple loci simultaneously using a SNP-based tag-array platform

John M. Maris
George Hii
Craig A. Gelfand
Shobha Varde
Peter S. White
Eric Rappaport
Saul Surrey
Paolo Fortina

First Published August 2, 2005

Methods

Estimating the tempo and mode of gene family evolution from comparative genomic data

Matthew W. Hahn
Tijl De Bie
Jason E. Stajich
Chi Nguyen
Nello Cristianini

First Published August 2, 2005

Methods

Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations

Nicolas Ray
Mathias Currat
Pierre Berthier
Laurent Excoffier

First Published August 2, 2005

Methods

Discovery, validation, and genetic dissection of transcription factor binding sites by comparative and functional genomics

Jason Gertz
Linda Riles
Peter Turnbaugh
Su-Wen Ho
Barak A. Cohen

First Published August 2, 2005

ARTICLE

Blochmannia pennsylvanicus indicates parallel evolutionary trends among bacterial mutualists of insects" > Genome sequence of Blochmannia pennsylvanicus indicates parallel evolutionary trends among bacterial mutualists of insects

Patrick H. Degnan
Adam B. Lazarus
Jennifer J. Wernegreen

First Published August 2, 2005

LETTER

cis-regulatory modules in aligned mammalian genome sequences" > Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences

David C. King
James Taylor
Laura Elnitski
Francesca Chiaromonte
Webb Miller
Ross C. Hardison

First Published July 15, 2005

LETTER

Gene-breaking: A new paradigm for human retrotransposon-mediated gene evolution

Sarah J. Wheelan
Yasunori Aizawa
Jeffrey S. Han
Jef D. Boeke

First Published July 15, 2005

ARTICLE

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

Adam Siepel
Gill Bejerano
Jakob S. Pedersen
Angie S. Hinrichs
Minmei Hou
Kate Rosenbloom Hiram Clawson John Spieth LaDeana W. Hillier Stephen Richards George M. Weinstock Richard K. Wilson
... [+7 authors] ...,
Richard A. Gibbs
W. James Kent
Webb Miller
David Haussler

First Published July 15, 2005

LETTER

Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations

Lawriston Wilson
Yung-Hao Ching
Michael Farias
Suzanne A. Hartford
Gareth Howell
Hongguang Shao
Maja Bucan
John C. Schimenti

First Published July 15, 2005

Methods

Identification of novel mammalian growth regulatory factors by genome-scale quantitative image analysis

Josephine N. Harada
Kristen E. Bower
Anthony P. Orth
Scott Callaway
Christian G. Nelson
Casey Laris
John B. Hogenesch
Peter K. Vogt
Sumit K. Chanda

First Published July 15, 2005

LETTER

The scale of mutational variation in the murid genome

Daniel J. Gaffney
Peter D. Keightley

First Published July 15, 2005

LETTER

Human ribosomal RNA gene arrays display a broad range of palindromic structures

Sandrine Caburet
Chiara Conti
Catherine Schurra
Ronald Lebofsky
Stuart J. Edelstein
Aaron Bensimon

First Published July 15, 2005

LETTER

Iroquois cluster gene deserts" > A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts

Elisa de la Calle-Mustienes
Cármen Gloria Feijóo
Miguel Manzanares
Juan J. Tena
Elisa Rodríguez-Seguel
Annalisa Letizia
Miguel L. Allende
José Luis Gómez-Skarmeta

First Published July 15, 2005

RESOURCE

The MicrobesOnline Web site for comparative genomics

Eric J. Alm
Katherine H. Huang
Morgan N. Price
Richard P. Koche
Keith Keller
Inna L. Dubchak
Adam P. Arkin

First Published July 5, 2005

Methods

Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

Philipp Kapranov
Jorg Drenkow
Jill Cheng
Jeffrey Long
Gregg Helt
Sujit Dike
Thomas R. Gingeras

First Published July 5, 2005

RESOURCE

An atlas of human gene expression from massively parallel signature sequencing (MPSS)

C. Victor Jongeneel
Mauro Delorenzi
Christian Iseli
Daixing Zhou
Christian D. Haudenschild
Irina Khrebtukova Dmitry Kuznetsov
... [+2 authors] ...,
Brian J. Stevenson
Robert L. Strausberg
Andrew J.G. Simpson
Thomas J. Vasicek

First Published July 5, 2005

Methods

Orthologous repeats and mammalian phylogenetic inference

Ali Bashir
Chun Ye
Alkes L. Price
Vineet Bafna

First Published July 5, 2005

LETTER

Assessing the limits of genomic data integration for predicting protein networks

Long J. Lu
Yu Xia
Alberto Paccanaro
Haiyuan Yu
Mark Gerstein

First Published July 5, 2005

LETTER

ABCG2 gene with a major effect on the QTL on chromosome 6 affecting milk yield and composition in Holstein cattle" > Identification of a missense mutation in the bovine ABCG2 gene with a major effect on the QTL on chromosome 6 affecting milk yield and composition in Holstein cattle

Miri Cohen-Zinder
Eyal Seroussi
Denis M. Larkin
Juan J. Loor
Annelie Everts-van der Wind
Jun-Heon Lee James K. Drackley Mark R. Band A.G. Hernandez
... [+4 authors] ...,
Moshe Shani
Harris A. Lewin
Joel I. Weller
Micha Ron

First Published July 5, 2005

Methods

BRCA1 and LDLR, and demonstration of the potential to identify severe, moderate, silent, rare, and paucimorphic mutations in the general population" > Mutation scanning by meltMADGE: Validations using BRCA1 and LDLR, and demonstration of the potential to identify severe, moderate, silent, rare, and paucimorphic mutations in the general population

Khalid K. Alharbi
Mohammed A. Aldahmesh
Emmanuel Spanakis
Lema Haddad
Roslyn A. Whittall
Xiao-he Chen Hamid Rassoulian Matt J. Smith Julie Sillibourne Nicola J. Ball Nikki J. Graham Patricia J. Briggs Iain A. Simpson David I.W. Phillips Deborah A. Lawlor Shu Ye Stephen E. Humphries Cyrus Cooper
... [+13 authors] ...,
George Davey Smith
Shah Ebrahim
Diana M. Eccles
Ian N.M. Day

First Published July 5, 2005

LETTER

Genomic deletion of a long-range bone enhancer misregulates sclerostin in Van Buchem disease

Gabriela G. Loots
Michaela Kneissel
Hansjoerg Keller
Myma Baptist
Jessie Chang
Nicole M. Collette
Dmitriy Ovcharenko
Ingrid Plajzer-Frick
Edward M. Rubin

First Published June 17, 2005

ARTICLE

Distribution and intensity of constraint in mammalian genomic sequence

Gregory M. Cooper
Eric A. Stone
George Asimenos
Eric D. Green
Serafim Batzoglou
Arend Sidow

First Published June 17, 2005

LETTER

The net of life: Reconstructing the microbial phylogenetic network

Victor Kunin
Leon Goldovsky
Nikos Darzentas
Christos A. Ouzounis

First Published June 17, 2005

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