3C sites in poly(A) RNA" > Nanopore direct RNA sequencing reveals METTL2A-mediated m3C sites in poly(A) RNA
- First Published October 30, 2025
Positive selective sweeps of epigenetic mutations regulating specialized metabolites in plants
- First Published May 18, 2021
Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes
- First Published May 18, 2017
A GC-rich sequence feature in the 3′ UTR directs UPF1-dependent mRNA decay in mammalian cells
- First Published December 9, 2016
Read clouds uncover variation in complex regions of the human genome
- First Published August 18, 2015
Parente2: a fast and accurate method for detecting identity by descent
- First Published October 1, 2014
Plasmodium falciparum" > Interactive transcriptome analysis of malaria patients and infecting Plasmodium falciparum
- First Published August 4, 2014
Coelacanth genomes reveal signatures for evolutionary transition from water to land
- First Published July 22, 2013
High-resolution DNA methylome analysis of primordial germ cells identifies gender-specific reprogramming in mice
- First Published February 14, 2013
Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements
- First Published September 5, 2012
Linking disease associations with regulatory information in the human genome
- First Published September 5, 2012
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- First Published September 5, 2012
Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns
- First Published June 11, 2012
Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals
- First Published February 27, 2012
Genome-wide characterization of transcriptional start sites in humans by integrative transcriptome analysis
- First Published March 3, 2011
Nucleotide composition-linked divergence of vertebrate core promoter architecture
- First Published January 10, 2011
Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes
- First Published January 12, 2010
Effect of genetic divergence in identifying ancestral origin using HAPAA
- First Published March 18, 2008
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
- First Published June 13, 2007
Toxoplasma gondii" > Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii
- First Published August 10, 2006
Græmlin: General and robust alignment of multiple large interaction networks
- First Published August 9, 2006
Distribution and intensity of constraint in mammalian genomic sequence
- First Published June 17, 2005
ProbCons: Probabilistic consistency-based multiple sequence alignment
- First Published February 1, 2005
Analysis of Small Human Proteins Reveals the Translation of Upstream Open Reading Frames of mRNAs
- First Published October 15, 2004
Sequence Comparison of Human and Mouse Genes Reveals a Homologous Block Structure in the Promoter Regions
- First Published September 1, 2004
Characterization of Evolutionary Rates and Constraints in Three Mammalian Genomes
- First Published April 1, 2004
Eukaryotic Regulatory Element Conservation Analysis and Identification Using Comparative Genomics
- First Published March 1, 2004
Quantitative Estimates of Sequence Divergence for Comparative Analyses of Mammalian Genomes
- First Published May 1, 2003
LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA
- First Published March 12, 2003
Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes
- First Published April 11, 2001
Human and Mouse Gene Structure: Comparative Analysis and Application to Exon Prediction
- First Published July 1, 2000
Sequencing a Genome by Walking with Clone-End Sequences: A Mathematical Analysis
- First Published December 1, 1999