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Research

Oikopleura dioica cryptic species" > Extreme genome scrambling in marine planktonic Oikopleura dioica cryptic species

  • First Published April 15, 2024
Research

Meta-analysis of human and mouse ALS astrocytes reveals multi-omic signatures of inflammatory reactive states

  • First Published December 28, 2021
Corrigendum

Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping

  • First Published September 14, 2020
Resource

Functional annotation of human long noncoding RNAs via molecular phenotyping

  • First Published July 27, 2020
Method

Genome-wide reconstitution of chromatin transactions reveals that RSC preferentially disrupts H2AZ-containing nucleosomes

  • First Published May 16, 2019
Research

Integrated analysis sheds light on evolutionary trajectories of young transcription start sites in the human genome

  • First Published April 4, 2018
Resource

The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements

  • First Published March 9, 2015
Research

Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements" > Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements

  • First Published September 24, 2013
Research

A genomic model of condition-specific nucleosome behavior explains transcriptional activity in yeast

  • First Published September 19, 2011
Method

Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities

  • First Published April 8, 2010
LETTER

E. coli" > Principles of transcriptional regulation and evolution of the metabolic system in E. coli

  • First Published October 3, 2008
Methods

Annotation Transfer Between Genomes: Protein–Protein Interologs and Protein–DNA Regulogs

  • First Published June 1, 2004
Methods

Human Disease Genes and Their Cloned Mouse Orthologs: Exploration of the FANTOM2 cDNA Sequence Data Set

  • First Published June 2, 2003
LETTER

Continued Discovery of Transcriptional Units Expressed in Cells of the Mouse Mononuclear Phagocyte Lineage

  • First Published June 2, 2003
LETTER

The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment

  • First Published June 2, 2003
LETTER

Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System

  • First Published June 2, 2003
LETTER

Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling

  • First Published June 2, 2003
LETTER

CDS Annotation in Full-Length cDNA Sequence

  • First Published June 2, 2003
RESOURCE

Development and Evaluation of an Automated Annotation Pipeline and cDNA Annotation System

  • First Published June 2, 2003
ARTICLE

Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia

  • First Published June 2, 2003
LETTER

Systematic Expression Profiling of the Mouse Transcriptome Using RIKEN cDNA Microarrays

  • First Published June 2, 2003
LETTER

Comprehensive Analysis of the Mouse Metabolome Based on the Transcriptome

  • First Published June 2, 2003
COMMENTARY

A Guide to the Mammalian Genome

  • First Published June 2, 2003
RESOURCE

Inferring Alternative Splicing Patterns in Mouse from a Full-Length cDNA Library and Microarray Data

  • First Published July 19, 2002
LETTER

Exploration of Novel Motifs Derived from Mouse cDNA Sequences

  • First Published February 15, 2002
LETTER

Molecular Fossils in the Human Genome: Identification and Analysis of the Pseudogenes in Chromosomes 21 and 22

  • First Published February 1, 2002
METHODS

Protein–Protein Interaction Panel Using Mouse Full-Length cDNAs

  • First Published September 20, 2001
INSIGHT/OUTLOOK

Interrelating Different Types of Genomic Data, from Proteome to Secretome: 'Oming in on Function

  • First Published September 1, 2001
LETTER

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

  • First Published November 1, 2000
METHODS

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

  • First Published October 1, 2000
LETTER

Automated Filtration-Based High-Throughput Plasmid Preparation System

  • First Published May 1, 1999
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