Research
Single-cell template strand sequencing reveals culture-induced chromosomal instability in a gibbon cell line
- First Published May 4, 2026
Research
Lake Malawi cichlid pangenome graph reveals extensive structural variation driven by transposable elements
- First Published April 10, 2025
Method
MCHelper automatically curates transposable element libraries across eukaryotic species
- First Published December 9, 2024
Method
Ultrafast genome-wide inference of pairwise coalescence times
- First Published August 10, 2023
Research
Diversity, duplication, and genomic organization of homeobox genes in Lepidoptera
- First Published December 8, 2022
Resource
A high-resolution map of small-scale inversions in the gibbon genome
- First Published September 30, 2022
Resource
Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution
- First Published October 22, 2020
Corrigendum
Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2
- First Published September 1, 2017
Resource
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
- First Published April 10, 2017
Method
Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes
- First Published December 16, 2016
Research
Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region
- First Published October 7, 2016
Research
Hominoid fission of chromosome 14/15 and the role of segmental duplications
- First Published September 27, 2013
Research
Evolution and diversity of copy number variation in the great ape lineage
- First Published July 3, 2013
Research
LRRC37 gene family" > Evolutionary dynamism of the primate LRRC37 gene family
- First Published October 11, 2012
Research
The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2
- First Published March 14, 2012
Resource
Copy number variation of individual cattle genomes using next-generation sequencing
- First Published February 2, 2012
Resource
Efficient de novo assembly of large genomes using compressed data structures
- First Published December 7, 2011
Resource
Assemblathon 1: A competitive assessment of de novo short read assembly methods
- First Published September 16, 2011
Research
Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee
- First Published June 17, 2011
Method
Revealing the genetic structure of a trait by sequencing a population under selection
- First Published March 21, 2011
Research
Alu repeat discovery and characterization within human genomes" > Alu repeat discovery and characterization within human genomes
- First Published December 3, 2010
Method
Genome-wide characterization of centromeric satellites from multiple mammalian genomes
- First Published November 16, 2010
Resource
SNP detection and genotyping from low-coverage sequencing data on multiple diploid samples
- First Published October 27, 2010
Resource
Analysis of copy number variations among diverse cattle breeds
- First Published March 8, 2010
Resource
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
- First Published June 4, 2009
Resource
The genomic architecture of segmental duplications and associated copy number variants in dogs
- First Published January 7, 2009
RESOURCE
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
- First Published November 24, 2008
LETTER
Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites
- First Published November 24, 2008
RESOURCE
Mapping short DNA sequencing reads and calling variants using mapping quality scores
- First Published August 19, 2008
LETTER
A genome-wide survey of structural variation between human and chimpanzee
- First Published September 16, 2005
LETTER
Punctuated duplication seeding events during the evolution of human chromosome 2p11
- First Published June 17, 2005
ARTICLE
Analysis of Segmental Duplications and Genome Assembly in the Mouse
- First Published May 3, 2004
LETTER
Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)
- First Published January 14, 2003
LETTER
Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25
- First Published January 1, 2003
METHODS
GAZE: A Generic Framework for the Integration of Gene-Prediction Data by Dynamic Programming
- First Published September 1, 2002
LETTER
Alfresco—A Workbench for Comparative Genomic Sequence Analysis
- First Published August 1, 2000
METHODS
GeneWise in the Drosophila Annotation Experiment" > Using GeneWise in the Drosophila Annotation Experiment
- First Published April 1, 2000
LETTER
Comparative Analysis of Noncoding Regions of 77 Orthologous Mouse and Human Gene Pairs
- First Published September 1, 1999
