Perspective
The impact of long-read sequencing on human population-scale genomics
- First Published April 14, 2025
Resource
An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes
- First Published December 5, 2024
Research
Gaps and complex structurally variant loci in phased genome assemblies
- First Published May 10, 2023
Resource
A high-resolution map of small-scale inversions in the gibbon genome
- First Published September 30, 2022
Research
Somatic structural variant formation is guided by and influences genome architecture
- First Published February 17, 2022
Corrigendum
Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping
- First Published September 14, 2020
Resource
Functional annotation of human long noncoding RNAs via molecular phenotyping
- First Published July 27, 2020
Research
Pan-cancer analysis distinguishes transcriptional changes of aneuploidy from proliferation
- First Published March 20, 2017
Resource
Drosophila melanogaster based on population-scale sequencing" > Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing
- First Published December 6, 2012
Research
Relating CNVs to transcriptome data at fine resolution: Assessment of the effect of variant size, type, and overlap with functional regions
- First Published August 23, 2011
Methods
MSB: A mean-shift-based approach for the analysis of structural variation in the genome
- First Published November 26, 2008
ARTICLE
The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci
- First Published June 13, 2007
LETTER
Structured RNAs in the ENCODE selected regions of the human genome
- First Published June 13, 2007
PERSPECTIVE
What is a gene, post-ENCODE? History and updated definition
- First Published June 13, 2007
Methods
Human Disease Genes and Their Cloned Mouse Orthologs: Exploration of the FANTOM2 cDNA Sequence Data Set
- First Published June 2, 2003
LETTER
Continued Discovery of Transcriptional Units Expressed in Cells of the Mouse Mononuclear Phagocyte Lineage
- First Published June 2, 2003
LETTER
The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment
- First Published June 2, 2003
LETTER
Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System
- First Published June 2, 2003
LETTER
Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling
- First Published June 2, 2003
RESOURCE
Development and Evaluation of an Automated Annotation Pipeline and cDNA Annotation System
- First Published June 2, 2003
ARTICLE
Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia
- First Published June 2, 2003
LETTER
Systematic Expression Profiling of the Mouse Transcriptome Using RIKEN cDNA Microarrays
- First Published June 2, 2003
LETTER
Comprehensive Analysis of the Mouse Metabolome Based on the Transcriptome
- First Published June 2, 2003
RESOURCE
Inferring Alternative Splicing Patterns in Mouse from a Full-Length cDNA Library and Microarray Data
- First Published July 19, 2002
LETTER
Exploration of Novel Motifs Derived from Mouse cDNA Sequences
- First Published February 15, 2002
METHODS
Protein–Protein Interaction Panel Using Mouse Full-Length cDNAs
- First Published September 20, 2001
LETTER
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
- First Published November 1, 2000
METHODS
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
- First Published October 1, 2000
LETTER
Automated Filtration-Based High-Throughput Plasmid Preparation System
- First Published May 1, 1999