Research
Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources
- First Published May 14, 2026
Method
Accurate sequencing of DNA motifs able to form alternative (non-B) structures
- First Published July 11, 2023
Research
Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome
- First Published June 29, 2021
Research
Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate
- First Published November 6, 2018
Corrigendum
Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?
- First Published October 3, 2016
Method
A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y
- First Published March 2, 2016
Method
Accurate typing of short tandem repeats from genome-wide sequencing data and its applications
- First Published March 30, 2015
Research
The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes
- First Published March 11, 2013
Research
A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?
- First Published March 28, 2012
Research
A matter of life or death: How microsatellites emerge in and vanish from the human genome
- First Published October 12, 2011
Method
Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage
- First Published August 27, 2010
Research
The (r)evolution of SINE versus LINE distributions in primate genomes: Sex chromosomes are important
- First Published March 10, 2010
Letter
Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention
- First Published August 24, 2009
Letter
Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions
- First Published June 5, 2009
LETTER
Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement
- First Published July 14, 2008
LETTER
The genome-wide determinants of human and chimpanzee microsatellite evolution
- First Published November 21, 2007
RESOURCE
A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly
- First Published June 13, 2007
LETTER
Transcript Level Alterations Reflect Gene Dosage Effects Across Multiple Tissues in a Mouse Model of Down Syndrome
- First Published July 1, 2004
RESOURCE
Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome
- First Published April 1, 2004
LETTER
The Genomic Sequence and Comparative Analysis of the Rat Major Histocompatibility Complex
- First Published April 1, 2004
LETTER
Insertions and Deletions Are Male Biased Too: A Whole-Genome Analysis in Rodents
- First Published April 1, 2004
RESOURCE
Generation, Annotation, Evolutionary Analysis, and Database Integration of 20,000 Unique Sea Urchin EST Clusters
- First Published December 1, 2003
Methods
Clone-Based Systematic Haplotyping (CSH): A Procedure for Physical Haplotyping of Whole Genomes
- First Published December 1, 2003
LETTER
Divergence in the Spatial Pattern of Gene Expression Between Human Duplicate Genes
- First Published July 1, 2003
ARTICLE
New Evidence for Genome-Wide Duplications at the Origin of Vertebrates Using an Amphioxus Gene Set and Completed Animal Genomes
- First Published June 1, 2003
METHODS
A Human cDNA Expression Library in Yeast Enriched for Open Reading Frames
- First Published September 20, 2001
RESOURCE
An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library
- First Published August 16, 2001
RESOURCE
Panel of Microsatellite Markers for Whole-Genome Scans and Radiation Hybrid Mapping and a Mouse Family Tree
- First Published September 1, 1999
LETTER
A Contiguous 3-Mb Sequence-Ready Map in the S3–MX Region on 21q22.2 Based on High- Throughput Nonisotopic Library Screenings
- First Published April 1, 1999
RESEARCH
Estimation of Distances and Map Construction Using Radiation Hybrids
- First Published May 1, 1998
LETTER
Bacterial Contig Map of the 21q11 Region Associated with Alzheimer’s Disease and Abnormal Myelopoiesis in Down Syndrome
- First Published April 1, 1998