Research
Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources
- First Published May 14, 2026
Erratum
Erratum: Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA
- First Published March 2, 2026
Method
Read-level genotyping of short tandem repeats using long reads and single-nucleotide variation with STRkit
- First Published January 15, 2026
Research
Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA
- First Published March 20, 2025
Research
SF3B1 mutations" > Long-read transcriptome sequencing of CLL and MDS patients uncovers molecular effects of SF3B1 mutations
- First Published September 13, 2024
Research
Gaps and complex structurally variant loci in phased genome assemblies
- First Published May 10, 2023
Method
Ultrafast functional profiling of RNA-seq data for nonmodel organisms
- First Published March 17, 2021
Research
Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition
- First Published May 9, 2011
Research
Transcriptional consequences of genomic structural aberrations in breast cancer
- First Published April 5, 2011
Research
Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomes
- First Published April 5, 2011
Method
Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage
- First Published August 27, 2010
LETTER
Evolution of the mammalian transcription factor binding repertoire via transposable elements
- First Published August 5, 2008
RESOURCE
Initial sequence and comparative analysis of the cat genome
- First Published November 1, 2007
LETTER
Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)
- First Published June 13, 2007
Forum
The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction
- First Published March 1, 2006
Chicken Special/Letters
Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages
- First Published December 8, 2004
LETTER
Transcript Level Alterations Reflect Gene Dosage Effects Across Multiple Tissues in a Mouse Model of Down Syndrome
- First Published July 1, 2004
ARTICLE
Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes
- First Published April 1, 2004
LETTER
Expression Profiling and Comparative Genomics Identify a Conserved Regulatory Region Controlling Midline Expression in the Zebrafish Embryo
- First Published January 12, 2004
RESOURCE
Generation, Annotation, Evolutionary Analysis, and Database Integration of 20,000 Unique Sea Urchin EST Clusters
- First Published December 1, 2003
ARTICLE
New Evidence for Genome-Wide Duplications at the Origin of Vertebrates Using an Amphioxus Gene Set and Completed Animal Genomes
- First Published June 1, 2003
LETTER
Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species
- First Published January 1, 2002
RESOURCE
An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library
- First Published August 16, 2001
