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Perspective

The Topological Regulatory Logic of noncoding RNA–mediated gene expression

  • First Published June 17, 2026
Method

Optimal marker genes for c-separated cell types with SepSolve

  • First Published October 9, 2025
Method

Linear-time cluster ensembles of large-scale single-cell RNA-seq and multimodal data

  • First Published February 24, 2021
Resource

A limited set of transcriptional programs define major cell types

  • First Published July 29, 2020
Resource

Dynamics of microRNA expression during mouse prenatal development

  • First Published October 23, 2019
Research

Genome-wide analysis of polymerase III–transcribed Alu elements suggests cell-type–specific enhancer function

  • First Published August 14, 2019
Method

An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics

  • First Published November 15, 2017
Research

Tandem repeat variation in human and great ape populations and its impact on gene expression divergence

  • First Published August 19, 2015
Method

Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

  • First Published July 22, 2013
Research

De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements

  • First Published June 28, 2013
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