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In memoriam

Jim Watson (1928–2025): a genomics visionary

  • First Published July 23, 2026
In memoriam

C. Thomas Caskey (1938–2022)

  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • First Published January 24, 2022
Research

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

  • First Published March 21, 2018
Method

Quantitative insertion-site sequencing (QIseq) for high throughput phenotyping of transposon mutants

  • First Published May 10, 2016
Research

Comparative analysis of the primate X-inactivation center region and reconstruction of the ancestral primate XIST locus

  • First Published April 25, 2011
Method

Revealing the genetic structure of a trait by sequencing a population under selection

  • First Published March 21, 2011
Method

Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing

  • First Published September 1, 2010
Resource

The completion of the Mammalian Gene Collection (MGC)

  • First Published September 18, 2009
Letter

Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans

  • First Published September 10, 2009
Resource

The ClinSeq Project: Piloting large-scale genome sequencing for research in genomic medicine

  • First Published July 14, 2009
LETTER

Comparative sequence analysis of primate subtelomeres originating from a chromosome fission event

  • First Published October 24, 2008
LETTER

Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

  • First Published June 26, 2008
LETTER

Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis

  • First Published April 10, 2008
LETTER

Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates

  • First Published November 21, 2007
ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • First Published June 13, 2007
LETTER

Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

  • First Published May 22, 2007
LETTER

Comparative sequence analyses reveal rapid and divergent evolutionary changes of the WFDC locus in the primate lineage

  • First Published January 31, 2007
LETTER

Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii

  • First Published August 10, 2006
RESOURCE

Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling

  • First Published May 3, 2006
LETTER

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

  • First Published April 10, 2006
ARTICLE

Distribution and intensity of constraint in mammalian genomic sequence

  • First Published June 17, 2005
ARTICLE

The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation

  • First Published April 18, 2005
LETTER

Reconstructing large regions of an ancestral mammalian genome in silico

  • First Published December 1, 2004
LETTER

An intermediate grade of finished genomic sequence suitable for comparative analyses

  • First Published October 12, 2004
RESOURCE

Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner

  • First Published April 1, 2004
ARTICLE

Identification and Characterization of Multi-Species Conserved Sequences

  • First Published December 1, 2003
LETTER

Quantitative Estimates of Sequence Divergence for Comparative Analyses of Mammalian Genomes

  • First Published May 1, 2003
METHODS

LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA

  • First Published March 12, 2003
LETTER

Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome

  • First Published March 1, 2003
LETTER

Pericentromeric Duplications in the Laboratory Mouse

  • First Published December 30, 2002
METHODS

Parallel Construction of Orthologous Sequence-Ready Clone Contig Maps in Multiple Species

  • First Published August 1, 2002
REPORT

Generation and Comparative Analysis of ∼3.3 Mb of Mouse Genomic Sequence Orthologous to the Region of Human Chromosome 7q11.23 Implicated in Williams Syndrome

  • First Published January 1, 2002
COMMENTARY

The Human Genome Sequence Expedition: Views from the “Base Camp”

  • First Published May 1, 2001
LETTER

The Complex Repeats of Dictyostelium discoideum

  • First Published March 13, 2001
REPORT

Comparative Genome Mapping in the Sequence-based Era: Early Experience with Human Chromosome 7

  • First Published May 1, 2000
REPORT

The Genomic Region Encompassing the Nephropathic Cystinosis Gene (CTNS): Complete Sequencing of a 200-kb Segment and Discovery of a Novel Gene within the Common Cystinosis-Causing Deletion

  • First Published February 1, 2000
LETTER

The CMT2D Locus: Refined Genetic Position and Construction of a Bacterial Clone-Based Physical Map

  • First Published June 1, 1999
LETTER

Comparative Mapping of the Region of Human Chromosome 7 Deleted in Williams Syndrome

  • First Published May 1, 1999
GENOME METHODS

Short-Insert Libraries as a Method of Problem Solving in Genome Sequencing

  • First Published May 1, 1998
LETTER

High Throughput Fingerprint Analysis of Large-Insert Clones

  • First Published November 1, 1997
RESEARCH

A Physical Map of Human Chromosome 7: An Integrated YAC Contig Map with Average STS Spacing of 79 kb

  • First Published July 1, 1997
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