Method
Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data
- First Published May 24, 2022
Method
Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants
- First Published August 23, 2018
Research
Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding
- First Published August 10, 2018
Research
Microbiota regulate intestinal epithelial gene expression by suppressing the transcription factor Hepatocyte nuclear factor 4 alpha
- First Published April 6, 2017
Research
Genome-wide specificity of DNA binding, gene regulation, and chromatin remodeling by TALE- and CRISPR/Cas9-based transcriptional activators
- First Published May 29, 2015
Research
DNase-seq predicts regions of rotational nucleosome stability across diverse human cell types
- First Published May 8, 2013
Research
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity
- First Published April 1, 2013
Research
Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions
- First Published March 12, 2013
Research
Effects of sequence variation on differential allelic transcription factor occupancy and gene expression
- First Published February 2, 2012
Research
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells
- First Published November 16, 2011
Research
Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration
- First Published July 27, 2011
Resource
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
- First Published July 12, 2011
Research
Comparative analysis of the primate X-inactivation center region and reconstruction of the ancestral primate XIST locus
- First Published April 25, 2011
Method
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
- First Published November 24, 2010
Method
Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing
- First Published September 1, 2010
Resource
The ClinSeq Project: Piloting large-scale genome sequencing for research in genomic medicine
- First Published July 14, 2009
Letter
Genomic distribution of CHD7 on chromatin tracks H3K4 methylation patterns
- First Published February 27, 2009
LETTER
Comparative sequence analysis of primate subtelomeres originating from a chromosome fission event
- First Published October 24, 2008
ARTICLE
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
- First Published June 13, 2007
LETTER
Comparative sequence analyses reveal rapid and divergent evolutionary changes of the WFDC locus in the primate lineage
- First Published January 31, 2007
ARTICLE
Distribution and intensity of constraint in mammalian genomic sequence
- First Published June 17, 2005
LETTER
Reconstructing large regions of an ancestral mammalian genome in silico
- First Published December 1, 2004
LETTER
An intermediate grade of finished genomic sequence suitable for comparative analyses
- First Published October 12, 2004
RESOURCE
Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner
- First Published April 1, 2004
ARTICLE
Identification and Characterization of Multi-Species Conserved Sequences
- First Published December 1, 2003
LETTER
Quantitative Estimates of Sequence Divergence for Comparative Analyses of Mammalian Genomes
- First Published May 1, 2003
METHODS
LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA
- First Published March 12, 2003
LETTER
Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome
- First Published March 1, 2003
METHODS
Parallel Construction of Orthologous Sequence-Ready Clone Contig Maps in Multiple Species
- First Published August 1, 2002
COMMENTARY
The Human Genome Sequence Expedition: Views from the “Base Camp”
- First Published May 1, 2001
REPORT
Comparative Genome Mapping in the Sequence-based Era: Early Experience with Human Chromosome 7
- First Published May 1, 2000
LETTER
The CMT2D Locus: Refined Genetic Position and Construction of a Bacterial Clone-Based Physical Map
- First Published June 1, 1999
LETTER
Comparative Mapping of the Region of Human Chromosome 7 Deleted in Williams Syndrome
- First Published May 1, 1999
RESEARCH
A Physical Map of Human Chromosome 7: An Integrated YAC Contig Map with Average STS Spacing of 79 kb
- First Published July 1, 1997