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In memoriam

Jim Watson (1928–2025): a genomics visionary

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Anne C. Ferguson-Smith
  • Richard A. Gibbs
  • Eric D. Green
  • John R. Inglis
  • Kateryna D. Makova
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published July 23, 2026
Editorial

RECOMB 2025 Special Issue

  • Sriram Sankararaman
  • Bonnie Berger
  • First Published December 3, 2025
Method

Graph-based deep reinforcement learning for haplotype assembly with Ralphi

  • Enzo Battistella
  • Anant Maheshwari
  • Barış Ekim
  • Bonnie Berger
  • Victoria Popic
  • First Published November 14, 2025
Method

Optimal marker genes for c-separated cell types with SepSolve

  • Bartol Borozan
  • Tomislav Prusina
  • Luka Borozan
  • Domagoj Ševerdija
  • Francisca Rojas Ringeling
  • Domagoj Matijević
  • Stefan Canzar
  • First Published October 9, 2025
Editorial

Innovations in computational biology: RECOMB 2024 Special Issue

  • Jian Ma
  • Bonnie Berger
  • First Published October 11, 2024
Resource

Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs

  • Ashlyn G. Anderson
  • Belle A. Moyers
  • Jacob M. Loupe
  • Ivan Rodriguez-Nunez
  • Stephanie A. Felker
  • James M.J. Lawlor William E. Bunney Blynn G. Bunney Preston M. Cartagena Adolfo Sequeira Stanley J. Watson
  • ... [+6 authors] ...,
  • Huda Akil
  • Eric M. Mendenhall
  • Gregory M. Cooper
  • Richard M. Myers
  • First Published August 16, 2024
Method

Secure discovery of genetic relatives across large-scale and distributed genomic data sets

  • Matthew M. Hong
  • David Froelicher
  • Ricky Magner
  • Victoria Popic
  • Bonnie Berger
  • Hyunghoon Cho
  • First Published August 7, 2024
Method

Probabilistic association of differentially expressed genes with cis-regulatory elements

  • Brian S. Roberts
  • Ashlyn G. Anderson
  • E. Christopher Partridge
  • Gregory M. Cooper
  • Richard M. Myers
  • First Published April 17, 2024
Research

Characterization of human transcription factor function and patterns of gene regulation in HepG2 cells

  • Belle A. Moyers
  • E. Christopher Partridge
  • Mark Mackiewicz
  • Michael J. Betti
  • Roshan Darji
  • Sarah K. Meadows Kimberly M. Newberry
  • ... [+2 authors] ...,
  • Laurel A. Brandsmeier
  • Barbara J. Wold
  • Eric M. Mendenhall
  • Richard M. Myers
  • First Published October 18, 2023
Method

Efficient minimizer orders for large values of k using minimum decycling sets

  • David Pellow
  • Lianrong Pu
  • Bariş Ekim
  • Lior Kotlar
  • Bonnie Berger
  • Ron Shamir
  • Yaron Orenstein
  • First Published August 9, 2023
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