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Read clouds uncover variation in complex regions of the human genome

  • First Published August 18, 2015

Parente2: a fast and accurate method for detecting identity by descent

  • First Published October 1, 2014

Genome evolution during progression to breast cancer

  • First Published April 8, 2013

Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements

  • First Published September 5, 2012

Linking disease associations with regulatory information in the human genome

  • First Published September 5, 2012

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

  • First Published September 5, 2012

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • First Published June 13, 2007

Græmlin: General and robust alignment of multiple large interaction networks

  • First Published August 9, 2006

Distribution and intensity of constraint in mammalian genomic sequence

  • First Published June 17, 2005

Automated Whole-Genome Multiple Alignment of Rat, Mouse, and Human

  • First Published April 1, 2004

Eukaryotic Regulatory Element Conservation Analysis and Identification Using Comparative Genomics

  • First Published March 1, 2004

Identification of Promoter Regions in the Human Genome by Using a Retroviral Plasmid Library-Based Functional Reporter Gene Assay

  • First Published June 12, 2003

LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA

  • First Published March 12, 2003

ARACHNE: A Whole-Genome Shotgun Assembler

  • First Published January 1, 2002

Sequencing a Genome by Walking with Clone-End Sequences: A Mathematical Analysis

  • First Published December 1, 1999
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