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Diversity, duplication, and genomic organization of homeobox genes in Lepidoptera

  • Peter O. Mulhair
  • Liam Crowley
  • Douglas H. Boyes
  • Amber Harper
  • Owen T. Lewis
  • Peter W.H. Holland Mark Blaxter Nova Mieszkowska Federica Di Palma Peter Holland Richard Durbin Thomas Richards Matthew Berriman Paul Kersey Peter Hollingsworth Willie Wilson Alex Twyford Ester Gaya Mara Lawniczak Owen Lewis Gavin Broad
  • ... [+16 authors] ...,
  • Kevin Howe
  • Michelle Hart
  • Paul Flicek
  • Ian Barnes
  • First Published December 8, 2022

Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data

  • Kaixuan Luo
  • Jianling Zhong
  • Alexias Safi
  • Linda K. Hong
  • Alok K. Tewari
  • Lingyun Song
  • ... [+1 authors] ...,
  • Timothy E. Reddy
  • Li Ma
  • Gregory E. Crawford
  • Alexander J. Hartemink
  • First Published May 24, 2022

Correcting signal biases and detecting regulatory elements in STARR-seq data

  • Young-Sook Kim
  • Graham D. Johnson
  • Jungkyun Seo
  • Alejandro Barrera
  • Thomas N. Cowart
  • William H. Majoros
  • Alejandro Ochoa
  • Andrew S. Allen
  • Timothy E. Reddy
  • First Published March 15, 2021

AP-1 subunits converge promiscuously at enhancers to potentiate transcription

  • Jungkyun Seo
  • D. Dewran Koçak
  • Luke C. Bartelt
  • Courtney A. Williams
  • Alejandro Barrera
  • Charles A. Gersbach
  • Timothy E. Reddy
  • First Published March 5, 2021

Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding

  • Ian C. McDowell
  • Alejandro Barrera
  • Anthony M. D'Ippolito
  • Christopher M. Vockley
  • Linda K. Hong
  • Sarah M. Leichter Luke C. Bartelt William H. Majoros Lingyun Song Alexias Safi D. Dewran Koçak Charles A. Gersbach
  • ... [+7 authors] ...,
  • Alexander J. Hartemink
  • Gregory E. Crawford
  • Barbara E. Engelhardt
  • Timothy E. Reddy
  • First Published August 10, 2018

Genomic approaches for understanding the genetics of complex disease

  • William L. Lowe
  • Timothy E. Reddy
  • First Published October 1, 2015

Massively parallel quantification of the regulatory effects of noncoding genetic variation in a human cohort

  • Christopher M. Vockley
  • Cong Guo
  • William H. Majoros
  • Michael Nodzenski
  • Denise M. Scholtens
  • M. Geoffrey Hayes
  • William L. Lowe
  • Timothy E. Reddy
  • First Published June 17, 2015

Genome-wide specificity of DNA binding, gene regulation, and chromatin remodeling by TALE- and CRISPR/Cas9-based transcriptional activators

  • Lauren R. Polstein
  • Pablo Perez-Pinera
  • D. Dewran Kocak
  • Christopher M. Vockley
  • Peggy Bledsoe
  • Lingyun Song
  • ... [+1 authors] ...,
  • Alexias Safi
  • Gregory E. Crawford
  • Timothy E. Reddy
  • Charles A. Gersbach
  • First Published May 29, 2015

Heliconius butterflies" > Genome-wide evidence for speciation with gene flow in Heliconius butterflies

  • Simon H. Martin
  • Kanchon K. Dasmahapatra
  • Nicola J. Nadeau
  • Camilo Salazar
  • James R. Walters
  • Fraser Simpson
  • ... [+1 authors] ...,
  • Mark Blaxter
  • Andrea Manica
  • James Mallet
  • Chris D. Jiggins
  • First Published September 17, 2013

Dynamic DNA methylation across diverse human cell lines and tissues

  • Katherine E. Varley
  • Jason Gertz
  • Kevin M. Bowling
  • Stephanie L. Parker
  • Timothy E. Reddy
  • Florencia Pauli-Behn Marie K. Cross Brian A. Williams John A. Stamatoyannopoulos
  • ... [+4 authors] ...,
  • Gregory E. Crawford
  • Devin M. Absher
  • Barbara J. Wold
  • Richard M. Myers
  • First Published January 16, 2013
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