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28-Way vertebrate alignment and conservation track in the UCSC Genome Browser

  • Webb Miller
  • Kate Rosenbloom
  • Ross C. Hardison
  • Minmei Hou
  • James Taylor
  • Brian Raney Richard Burhans David C. King Robert Baertsch Daniel Blankenberg Sergei L. Kosakovsky Pond Anton Nekrutenko Belinda Giardine Robert S. Harris Svitlana Tyekucheva Mark Diekhans Thomas H. Pringle William J. Murphy Arthur Lesk George M. Weinstock Kerstin Lindblad-Toh Richard A. Gibbs
  • ... [+17 authors] ...,
  • Eric S. Lander
  • Adam Siepel
  • David Haussler
  • W. James Kent
  • First Published November 5, 2007

A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly

  • Daniel Blankenberg
  • James Taylor
  • Ian Schenck
  • Jianbin He
  • Yi Zhang
  • Matthew Ghent Narayanan Veeraraghavan Istvan Albert
  • ... [+3 authors] ...,
  • Webb Miller
  • Kateryna D. Makova
  • Ross C. Hardison
  • Anton Nekrutenko
  • First Published June 13, 2007

ESPERR: Learning strong and weak signals in genomic sequence alignments to identify functional elements

  • James Taylor
  • Svitlana Tyekucheva
  • David C. King
  • Ross C. Hardison
  • Webb Miller
  • Francesca Chiaromonte
  • First Published October 19, 2006

Galaxy: A platform for interactive large-scale genome analysis

  • Belinda Giardine
  • Cathy Riemer
  • Ross C. Hardison
  • Richard Burhans
  • Laura Elnitski
  • Prachi Shah Yi Zhang Daniel Blankenberg Istvan Albert
  • ... [+4 authors] ...,
  • James Taylor
  • Webb Miller
  • W. James Kent
  • Anton Nekrutenko
  • First Published September 16, 2005

Connecting Sequence and Biology in the Laboratory Mouse

  • Richard M. Baldarelli
  • David P. Hill
  • Judith A. Blake
  • Jun Adachi
  • Masaaki Furuno
  • Dirck Bradt Lori E. Corbani Sharon Cousins Kenneth S. Frazer Dong Qi Longlong Yang Sridhar Ramachandran Deborah Reed Yunxia Zhu Takeya Kasukawa Martin Ringwald Benjamin L. King Lois J. Maltais Louise M. McKenzie Lynn M. Schriml Donna Maglott Deanna M. Church Kim Pruitt
  • ... [+18 authors] ...,
  • Janan T. Eppig
  • Joel E. Richardson
  • Jim A. Kadin
  • Carol J. Bult
  • First Published June 2, 2003

Development and Evaluation of an Automated Annotation Pipeline and cDNA Annotation System

  • Takeya Kasukawa
  • Masaaki Furuno
  • Itoshi Nikaido
  • Hidemasa Bono
  • David A. Hume
  • Carol Bult David P. Hill Richard Baldarelli Julian Gough Alexander Kanapin Hideo Matsuda
  • ... [+6 authors] ...,
  • Lynn M. Schriml
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • John Quackenbush
  • First Published June 2, 2003
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