Skip to main page content
HOME
ABOUT
ARCHIVE
SUBMIT
SUBSCRIBE
ADVERTISE
AUTHOR INFO
CONTACT
HELP
Search for Keyword:
GO
Advanced Search
Searching
journal content
for
W. James Kent
in
author
.
Displaying results 1-10 of
17
For checked items
view abstracts
download to citation manager
Select this article
Method
:
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
Ashis Saha
,
Yungil Kim
,
Ariel D.H. Gewirtz
,
Brian Jo
,
Chuan Gao
,
Ian C. McDowell
,
The GTEx Consortium
,
Barbara E. Engelhardt
,
and
Alexis Battle
Genome Res.
November 2017
27
:
1843
-
1858
;
Published in Advance
October 11, 2017
,
doi:
10.1101/gr.216721.116
Abstract
Full Text
Full Text (PDF)
Supplemental Material
OPEN ACCESS ARTICLE
Select this article
Method
:
Identifying
cis
-mediators for
trans
-eQTLs across many human tissues using genomic mediation analysis
Fan Yang
,
Jiebiao Wang
,
The GTEx Consortium
,
Brandon L. Pierce
,
and
Lin S. Chen
Genome Res.
November 2017
27
:
1859
-
1871
;
Published in Advance
October 11, 2017
,
doi:
10.1101/gr.216754.116
Abstract
Full Text
Full Text (PDF)
Supplemental Material
Select this article
Resource
:
Alignathon: a competitive assessment of whole-genome alignment methods
Dent Earl
,
Ngan Nguyen
,
Glenn Hickey
,
Robert S. Harris
,
Stephen Fitzgerald
,
Kathryn Beal
,
Igor Seledtsov
,
Vladimir Molodtsov
,
Brian J. Raney
,
Hiram Clawson
,
Jaebum Kim
,
Carsten Kemena
,
Jia-Ming Chang
,
Ionas Erb
,
Alexander Poliakov
,
Minmei Hou
,
Javier Herrero
,
William James Kent
,
Victor Solovyev
,
Aaron E. Darling
,
Jian Ma
,
Cedric Notredame
,
Michael Brudno
,
Inna Dubchak
,
David Haussler
,
and
Benedict Paten
Genome Res.
December 2014
24
:
2077
-
2089
;
Published in Advance
October 1, 2014
,
doi:
10.1101/gr.174920.114
Abstract
Full Text
Full Text (PDF)
Supplemental Material
OPEN ACCESS ARTICLE
Select this article
Method
:
Centromere reference models for human chromosomes X and Y satellite arrays
Karen H. Miga
,
Yulia Newton
,
Miten Jain
,
Nicolas Altemose
,
Huntington F. Willard
,
and
W. James Kent
Genome Res.
April 2014
24
:
697
-
707
;
Published in Advance
February 5, 2014
,
doi:
10.1101/gr.159624.113
Abstract
Full Text
Full Text (PDF)
Supplemental Material
Select this article
RESOURCE
:
28-Way vertebrate alignment and conservation track in the UCSC Genome Browser
Webb Miller
,
Kate Rosenbloom
,
Ross C. Hardison
,
Minmei Hou
,
James Taylor
,
Brian Raney
,
Richard Burhans
,
David C. King
,
Robert Baertsch
,
Daniel Blankenberg
,
Sergei L. Kosakovsky Pond
,
Anton Nekrutenko
,
Belinda Giardine
,
Robert S. Harris
,
Svitlana Tyekucheva
,
Mark Diekhans
,
Thomas H. Pringle
,
William J. Murphy
,
Arthur Lesk
,
George M. Weinstock
,
Kerstin Lindblad-Toh
,
Richard A. Gibbs
,
Eric S. Lander
,
Adam Siepel
,
David Haussler
,
and
W. James Kent
Genome Res.
December 2007
17
:
1797
-
1808
;
Published in Advance
November 5, 2007
,
doi:
10.1101/gr.6761107
Abstract
Full Text
Full Text (PDF)
Supplemental Research Data
Select this article
ARTICLE
:
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
Elliott H. Margulies
,
Gregory M. Cooper
,
George Asimenos
,
Daryl J. Thomas
,
Colin N. Dewey
,
Adam Siepel
,
Ewan Birney
,
Damian Keefe
,
Ariel S. Schwartz
,
Minmei Hou
,
James Taylor
,
Sergey Nikolaev
,
Juan I. Montoya-Burgos
,
Ari Löytynoja
,
Simon Whelan
,
Fabio Pardi
,
Tim Massingham
,
James B. Brown
,
Peter Bickel
,
Ian Holmes
,
James C. Mullikin
,
Abel Ureta-Vidal
,
Benedict Paten
,
Eric A. Stone
,
Kate R. Rosenbloom
,
W. James Kent
,
Gerard G. Bouffard
,
Xiaobin Guan
,
Nancy F. Hansen
,
Jacquelyn R. Idol
,
Valerie V.B. Maduro
,
Baishali Maskeri
,
Jennifer C. McDowell
,
Morgan Park
,
Pamela J. Thomas
,
Alice C. Young
,
Robert W. Blakesley
,
Donna M. Muzny
,
Erica Sodergren
,
David A. Wheeler
,
Kim C. Worley
,
Huaiyang Jiang
,
George M. Weinstock
,
Richard A. Gibbs
,
Tina Graves
,
Robert Fulton
,
Elaine R. Mardis
,
Richard K. Wilson
,
Michele Clamp
,
James Cuff
,
Sante Gnerre
,
David B. Jaffe
,
Jean L. Chang
,
Kerstin Lindblad-Toh
,
Eric S. Lander
,
Angie Hinrichs
,
Heather Trumbower
,
Hiram Clawson
,
Ann Zweig
,
Robert M. Kuhn
,
Galt Barber
,
Rachel Harte
,
Donna Karolchik
,
Matthew A. Field
,
Richard A. Moore
,
Carrie A. Matthewson
,
Jacqueline E. Schein
,
Marco A. Marra
,
Stylianos E. Antonarakis
,
Serafim Batzoglou
,
Nick Goldman
,
Ross Hardison
,
David Haussler
,
Webb Miller
,
Lior Pachter
,
Eric D. Green
,
and
Arend Sidow
Genome Res.
June 2007
17
:
760
-
774
;
doi:
10.1101/gr.6034307
Abstract
Full Text
Full Text (PDF)
Supplemental Reseach Data
OPEN ACCESS ARTICLE
Select this article
Methods
:
Reconstructing contiguous regions of an ancestral genome
Jian Ma
,
Louxin Zhang
,
Bernard B. Suh
,
Brian J. Raney
,
Richard C. Burhans
,
W. James Kent
,
Mathieu Blanchette
,
David Haussler
,
and
Webb Miller
Genome Res.
December 2006
16
:
1557
-
1565
;
Published in Advance
September 18, 2006
,
doi:
10.1101/gr.5383506
Abstract
Full Text
Full Text (PDF)
Supplemental Research Data
OPEN ACCESS ARTICLE
Select this article
RESOURCE
:
Galaxy: A platform for interactive large-scale genome analysis
Belinda Giardine
,
Cathy Riemer
,
Ross C. Hardison
,
Richard Burhans
,
Laura Elnitski
,
Prachi Shah
,
Yi Zhang
,
Daniel Blankenberg
,
Istvan Albert
,
James Taylor
,
Webb Miller
,
W. James Kent
,
and
Anton Nekrutenko
Genome Res.
October 2005
15
:
1451
-
1455
;
Published in Advance
September 16, 2005
,
doi:
10.1101/gr.4086505
Abstract
Full Text
Full Text (PDF)
Supplemental Reseach Data
Select this article
ARTICLE
:
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
Adam Siepel
,
Gill Bejerano
,
Jakob S. Pedersen
,
Angie S. Hinrichs
,
Minmei Hou
,
Kate Rosenbloom
,
Hiram Clawson
,
John Spieth
,
LaDeana W. Hillier
,
Stephen Richards
,
George M. Weinstock
,
Richard K. Wilson
,
Richard A. Gibbs
,
W. James Kent
,
Webb Miller
,
and
David Haussler
Genome Res.
August 2005
15
:
1034
-
1050
;
Published in Advance
July 15, 2005
,
doi:
10.1101/gr.3715005
Abstract
Full Text
Full Text (PDF)
Supplemental Research Data
Select this article
RESOURCE
:
Exploring relationships and mining data with the UCSC Gene Sorter
W.J. Kent
,
Fan Hsu
,
Donna Karolchik
,
Robert M. Kuhn
,
Hiram Clawson
,
Heather Trumbower
,
and
David Haussler
Genome Res.
May 2005
15
:
737
-
741
;
doi:
10.1101/gr.3694705
Abstract
Full Text
Full Text (PDF)
Supplemental Research Data
For checked items
view abstracts
download to citation manager
Search Results
Next 7 »
New Search
Modify Results
Citation format:
standard
condensed
Results / page:
10
25
40
60
80
Results order:
relevance
most recent
earliest first
This search
Alert me
when new articles matching this search are published
Download all
citations on this page to my citation manager
Preprint Server
Current Issue
March 2026, 36 (3)
In This Issue
Single-cell gene signature scoring
Chromosome engineering in 8p syndrome
Convergent evolution in arid rodents
Short tandem repeat genotyping using long reads
Spectral component approach for recent population structure
Alert me to new issues of
Genome Research
Advance Online Articles
Submit a Manuscript
GR in the News
Editorial Board
Permissions
E-mail Alerts & RSS Feeds
Recommend to Your Library
Job Opportunities