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  Selection and explosive growth alter genetic architecture and hamper the detection of causal rare variants

  • Lawrence H. Uricchio,
  • Noah A. Zaitlen,
  • Chun Jimmie Ye,
  • John S. Witte,
  • and Ryan D. Hernandez

  Genome Res. July 2016 26: 863-873; Published in Advance May 18, 2016, doi:10.1101/gr.202440.115
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  Elevated variant density around SV breakpoints in germline lineage lends support to error-prone replication hypothesis

  • Dhananjay Dhokarh and
  • Alexej Abyzov

  Genome Res. July 2016 26: 874-881; Published in Advance May 23, 2016, doi:10.1101/gr.205484.116
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  Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic

  • Annelien Verfaillie,
  • Dmitry Svetlichnyy,
  • Hana Imrichova,
  • Kristofer Davie,
  • Mark Fiers,
  • Zeynep Kalender Atak,
  • Gert Hulselmans,
  • Valerie Christiaens,
  • and Stein Aerts

  Genome Res. July 2016 26: 882-895; Published in Advance May 18, 2016, doi:10.1101/gr.204149.116
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  The interaction of PRC2 with RNA or chromatin is mutually antagonistic

  • Manuel Beltran,
  • Christopher M. Yates,
  • Lenka Skalska,
  • Marcus Dawson,
  • Filipa P. Reis,
  • Keijo Viiri,
  • Cynthia L. Fisher,
  • Christopher R. Sibley,
  • Benjamin M. Foster,
  • Till Bartke,
  • Jernej Ule,
  • and Richard G. Jenner

  Genome Res. July 2016 26: 896-907; Published in Advance May 9, 2016, doi:10.1101/gr.197632.115
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  Distinct transcription factor complexes act on a permissive chromatin landscape to establish regionalized gene expression in CNS stem cells

  • Daniel W. Hagey,
  • Cécile Zaouter,
  • Gaëlle Combeau,
  • Monika Andersson Lendahl,
  • Olov Andersson,
  • Mikael Huss,
  • and Jonas Muhr

  Genome Res. July 2016 26: 908-917; Published in Advance May 2, 2016, doi:10.1101/gr.203513.115
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  Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genus

  • Nikolaos Vakirlis,
  • Véronique Sarilar,
  • Guénola Drillon,
  • Aubin Fleiss,
  • Nicolas Agier,
  • Jean-Philippe Meyniel,
  • Lou Blanpain,
  • Alessandra Carbone,
  • Hugo Devillers,
  • Kenny Dubois,
  • Alexandre Gillet-Markowska,
  • Stéphane Graziani,
  • Nguyen Huu-Vang,
  • Marion Poirel,
  • Cyrielle Reisser,
  • Jonathan Schott,
  • Joseph Schacherer,
  • Ingrid Lafontaine,
  • Bertrand Llorente,
  • Cécile Neuvéglise,
  • and Gilles Fischer

  Genome Res. July 2016 26: 918-932; Published in Advance May 31, 2016, doi:10.1101/gr.204420.116
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  Global analysis of transcriptionally engaged yeast RNA polymerase III reveals extended tRNA transcripts

  • Tomasz W. Turowski,
  • Ewa Leśniewska,
  • Clementine Delan-Forino,
  • Camille Sayou,
  • Magdalena Boguta,
  • and David Tollervey

  Genome Res. July 2016 26: 933-944; Published in Advance May 20, 2016, doi:10.1101/gr.205492.116
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  A novel nuclear genetic code alteration in yeasts and the evolution of codon reassignment in eukaryotes

  • Stefanie Mühlhausen,
  • Peggy Findeisen,
  • Uwe Plessmann,
  • Henning Urlaub,
  • and Martin Kollmar

  Genome Res. July 2016 26: 945-955; Published in Advance May 6, 2016, doi:10.1101/gr.200931.115
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