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Table of Contents
August 2016; 26 (8)
Research
Select this article
TBR1 regulates autism risk genes in the developing neocortex
James H. Notwell
,
Whitney E. Heavner
,
Siavash Fazel Darbandi
,
Sol Katzman
,
William L. McKenna
,
Christian F. Ortiz-Londono
,
David Tastad
,
Matthew J. Eckler
,
John L.R. Rubenstein
,
Susan K. McConnell
,
Bin Chen
,
and
Gill Bejerano
Genome Res.
August 2016
26
:
1013
-
1022
;
Published in Advance
June 20, 2016
,
doi:
10.1101/gr.203612.115
Abstract
Full Text
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High-throughput functional comparison of promoter and enhancer activities
Thomas A. Nguyen
,
Richard D. Jones
,
Andrew R. Snavely
,
Andreas R. Pfenning
,
Rory Kirchner
,
Martin Hemberg
,
and
Jesse M. Gray
Genome Res.
August 2016
26
:
1023
-
1033
;
Published in Advance
June 16, 2016
,
doi:
10.1101/gr.204834.116
Abstract
Full Text
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Sperm is epigenetically programmed to regulate gene transcription in embryos
Marta Teperek
,
Angela Simeone
,
Vincent Gaggioli
,
Kei Miyamoto
,
George E. Allen
,
Serap Erkek
,
Taejoon Kwon
,
Edward M. Marcotte
,
Philip Zegerman
,
Charles R. Bradshaw
,
Antoine H.F.M. Peters
,
John B. Gurdon
,
and
Jerome Jullien
Genome Res.
August 2016
26
:
1034
-
1046
;
Published in Advance
March 31, 2016
,
doi:
10.1101/gr.201541.115
Abstract
Full Text
Full Text (PDF)
Supplemental Material
OPEN ACCESS ARTICLE
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Novel features of telomere biology revealed by the absence of telomeric DNA methylation
Alejandro Vega-Vaquero
,
Giancarlo Bonora
,
Marco Morselli
,
María I. Vaquero-Sedas
,
Liudmilla Rubbi
,
Matteo Pellegrini
,
and
Miguel A. Vega-Palas
Genome Res.
August 2016
26
:
1047
-
1056
;
Published in Advance
July 12, 2016
,
doi:
10.1101/gr.202465.115
Abstract
Full Text
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Genome-wide analysis of chromatin packing in
Arabidopsis thaliana
at single-gene resolution
Chang Liu
,
Congmao Wang
,
George Wang
,
Claude Becker
,
Maricris Zaidem
,
and
Detlef Weigel
Genome Res.
August 2016
26
:
1057
-
1068
;
Published in Advance
May 25, 2016
,
doi:
10.1101/gr.204032.116
Abstract
Full Text
Full Text (PDF)
Supplemental Material
OPEN ACCESS ARTICLE
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Neurospora
chromosomes are organized by blocks of importin alpha-dependent heterochromatin that are largely independent of H3K9me3
Jonathan M. Galazka
,
Andrew D. Klocko
,
Miki Uesaka
,
Shinji Honda
,
Eric U. Selker
,
and
Michael Freitag
Genome Res.
August 2016
26
:
1069
-
1080
;
Published in Advance
June 3, 2016
,
doi:
10.1101/gr.203182.115
Abstract
Full Text
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Global deceleration of gene evolution following recent genome hybridizations in fungi
Sira Sriswasdi
,
Masako Takashima
,
Ri-ichiroh Manabe
,
Moriya Ohkuma
,
Takashi Sugita
,
and
Wataru Iwasaki
Genome Res.
August 2016
26
:
1081
-
1090
;
Published in Advance
July 20, 2016
,
doi:
10.1101/gr.205948.116
Abstract
Full Text
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Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen
Luigi Faino
,
Michael F. Seidl
,
Xiaoqian Shi-Kunne
,
Marc Pauper
,
Grardy C.M. van den Berg
,
Alexander H.J. Wittenberg
,
and
Bart P.H.J. Thomma
Genome Res.
August 2016
26
:
1091
-
1100
;
Published in Advance
June 20, 2016
,
doi:
10.1101/gr.204974.116
Abstract
Full Text
Full Text (PDF)
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Recent independent emergence of multiple multidrug-resistant
Serratia marcescens
clones within the United Kingdom and Ireland
Danesh Moradigaravand
,
Christine J. Boinett
,
Veronique Martin
,
Sharon J. Peacock
,
and
Julian Parkhill
Genome Res.
August 2016
26
:
1101
-
1109
;
Published in Advance
July 18, 2016
,
doi:
10.1101/gr.205245.116
Abstract
Full Text
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Methods
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Heterogeneity of transcription factor binding specificity models within and across cell lines
Mahfuza Sharmin
,
Héctor Corrada Bravo
,
and
Sridhar Hannenhalli
Genome Res.
August 2016
26
:
1110
-
1123
;
Published in Advance
June 16, 2016
,
doi:
10.1101/gr.199166.115
Abstract
Full Text
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Integrative analysis with ChIP-seq advances the limits of transcript quantification from RNA-seq
Peng Liu
,
Rajendran Sanalkumar
,
Emery H. Bresnick
,
Sündüz Keleş
,
and
Colin N. Dewey
Genome Res.
August 2016
26
:
1124
-
1133
;
Published in Advance
July 12, 2016
,
doi:
10.1101/gr.199174.115
Abstract
Full Text
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TransRate: reference-free quality assessment of de novo transcriptome assemblies
Richard Smith-Unna
,
Chris Boursnell
,
Rob Patro
,
Julian M. Hibberd
,
and
Steven Kelly
Genome Res.
August 2016
26
:
1134
-
1144
;
Published in Advance
June 1, 2016
,
doi:
10.1101/gr.196469.115
Abstract
Full Text
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Resource
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A comprehensive analysis of 3′ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation
Andreas J. Gruber
,
Ralf Schmidt
,
Andreas R. Gruber
,
Georges Martin
,
Souvik Ghosh
,
Manuel Belmadani
,
Walter Keller
,
and
Mihaela Zavolan
Genome Res.
August 2016
26
:
1145
-
1159
;
Published in Advance
July 5, 2016
,
doi:
10.1101/gr.202432.115
Abstract
Full Text
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This Issue
August 2016;
26
(8)
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