Index by Author

March 2026; 36 (3)
  1. A
  2. B
  3. C
  4. D
  5. E
  6. F
  7. G
  8. H
  9. I
  10. J
  11. K
  12. L
  13. M
  14. N
  15. O
  16. P
  17. Q
  18. R
  19. S
  20. T
  21. U
  22. V
  23. W
  24. X
  25. Y
  26. Z

A

  1. Abbasian, Mahnaz

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

  2. Agier, Nicolas

  3. Agnadottir, Vedis

  4. Ahmed, Shariq

  5. Al Ali, Ayesha

  6. Al Marzooqi, Fahed

  7. Aldhuhoori, Fatmah

  8. Arres, Judith

  9. Ashford, Paul

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

  10. Attia, Azza

  11. Azadova, Aygun

B

  1. Bakir, Maise Al

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

  2. Banda, Erin C.

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  3. Barkmann, Florian

  4. Bates, Andrew D.

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  5. Behl, Shalini

  6. Belbin, Gillian M.

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  7. Blin, Juliana

  8. Bodelón, Alejandra

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  9. Boeva, Valentina

    • Early feature extraction drives model performance in high-resolution chromatin accessibility prediction Genome Res. March 2026 36: 619-629; Published in Advance January 12, 2026, doi:10.1101/gr.281042.125
      OPEN ACCESS ARTICLE
    • Robust and efficient annotation of cell states through gene signature scoring Genome Res. March 2026 36: 630-644; Published in Advance February 18, 2026, doi:10.1101/gr.280926.125
      OPEN ACCESS ARTICLE

  10. Bourque, Guillaume

    • Read-level genotyping of short tandem repeats using long reads and single-nucleotide variation with STRkit Genome Res. March 2026 36: 578-588; Published in Advance January 15, 2026, doi:10.1101/gr.280766.125
    • Erratum: Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA Genome Res. March 2026 36: 660; doi:10.1101/gr.281963.126
      OPEN ACCESS ARTICLE

  11. Boussau, Bastien

  12. Brennan, Louise

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  13. Brooke, Greg N.

C

  1. Caggiano, Christa

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  2. Cardenas, Raony

  3. Cardoso, Thyago

  4. Chalopin, Domitille

  5. Cheng, Feixiong

    • Cell type–specific gene regulatory atlas prioritizes drug targets and repurposable medicines in Alzheimer's disease Genome Res. March 2026 36: 645-659; Published in Advance January 21, 2026, doi:10.1101/gr.280436.125
      OPEN ACCESS ARTICLE

  6. Cheung, Warren A.

    • Erratum: Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA Genome Res. March 2026 36: 660; doi:10.1101/gr.281963.126
      OPEN ACCESS ARTICLE

  7. Chevret, Pascale

  8. Ciernik, Laure

  9. Cullina, Sinead

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  10. Cummings, Jeffrey

    • Cell type–specific gene regulatory atlas prioritizes drug targets and repurposable medicines in Alzheimer's disease Genome Res. March 2026 36: 645-659; Published in Advance January 21, 2026, doi:10.1101/gr.280436.125
      OPEN ACCESS ARTICLE

D

  1. Davoli, Teresa

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

E

  1. Ekperuoh, Anthonia

  2. Elavalli, Santosh

  3. Elgood Hunt, Eleanor

  4. El-Khani, Albarah

F

  1. Fawcett, Conor

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  2. Fischer, Gilles

  3. Frankell, Alexander M.

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

G

  1. Ganofsky, Jeremy

  2. Garrido, Clotilde

  3. Ge, Bing

    • Erratum: Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA Genome Res. March 2026 36: 660; doi:10.1101/gr.281963.126
      OPEN ACCESS ARTICLE

  4. Gignoux, Christopher R.

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  5. Gómez-Muñoz, Cintia

  6. Grewal, Manreen

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  7. Grover, Aayush

    • Early feature extraction drives model performance in high-resolution chromatin accessibility prediction Genome Res. March 2026 36: 619-629; Published in Advance January 12, 2026, doi:10.1101/gr.281042.125
      OPEN ACCESS ARTICLE

  8. Groza, Cristian

    • Erratum: Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA Genome Res. March 2026 36: 660; doi:10.1101/gr.281963.126
      OPEN ACCESS ARTICLE

  9. Grzela, Dawid

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  10. Guéguen, Laurent

H

  1. Hagenson, Ryan A.

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  2. Hammond, Beth

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  3. Hu, Ming

    • Cell type–specific gene regulatory atlas prioritizes drug targets and repurposable medicines in Alzheimer's disease Genome Res. March 2026 36: 645-659; Published in Advance January 21, 2026, doi:10.1101/gr.280436.125
      OPEN ACCESS ARTICLE

I

  1. Ilioaia, Oana

J

  1. Jamal-Hanjani, Mariam

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

K

  1. Kasak, Liine

    • Early feature extraction drives model performance in high-resolution chromatin accessibility prediction Genome Res. March 2026 36: 619-629; Published in Advance January 12, 2026, doi:10.1101/gr.281042.125
      OPEN ACCESS ARTICLE

  2. Katagi, Gurunath

  3. Kenny, Eimear E.

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  4. Kornobis, Etienne

  5. Kraft, Agnieszka

  6. Krymova, Ekaterina

    • Early feature extraction drives model performance in high-resolution chromatin accessibility prediction Genome Res. March 2026 36: 619-629; Published in Advance January 12, 2026, doi:10.1101/gr.281042.125
      OPEN ACCESS ARTICLE

  7. Kusuma, Vinay

L

  1. Larue, Anaïs

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  2. Lee, Sophia N.

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  3. Li, Yang E.

    • Cell type–specific gene regulatory atlas prioritizes drug targets and repurposable medicines in Alzheimer's disease Genome Res. March 2026 36: 645-659; Published in Advance January 21, 2026, doi:10.1101/gr.280436.125
      OPEN ACCESS ARTICLE

  4. Lougheed, David R.

    • Read-level genotyping of short tandem repeats using long reads and single-nucleotide variation with STRkit Genome Res. March 2026 36: 578-588; Published in Advance January 15, 2026, doi:10.1101/gr.280766.125

  5. Luo, Ximei

    • EnDeep4mC predicts DNA N4-methylcytosine sites using a dual-adaptive feature encoding framework in deep ensembles Genome Res. March 2026 36: 589-599; Published in Advance February 17, 2026, doi:10.1101/gr.280977.125
      OPEN ACCESS ARTICLE

  6. Lv, Zhibin

    • EnDeep4mC predicts DNA N4-methylcytosine sites using a dual-adaptive feature encoding framework in deep ensembles Genome Res. March 2026 36: 589-599; Published in Advance February 17, 2026, doi:10.1101/gr.280977.125
      OPEN ACCESS ARTICLE

M

  1. Ma, Yiming

    • Pangenome analysis reveals families of ubiquitin-ligase adaptors as key genomic divergence drivers that lead to hybrid incompatibility Genome Res. March 2026 36: 506-521; Published in Advance February 17, 2026, doi:10.1101/gr.280885.125

  2. Mafofo, Joseph

  3. Magalhães, Tiago R.

  4. Marcia Aparecida Carareto, Claudia

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  5. Marco, Antonio

  6. Matias Sanchez, Daniel

  7. McClurg, Urszula L.

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  8. McGranahan, Nicholas

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

  9. Minas, Cyla

  10. Mitter, Richard

  11. Mouginot, Marion

  12. Muser, Till

    • Early feature extraction drives model performance in high-resolution chromatin accessibility prediction Genome Res. March 2026 36: 619-629; Published in Advance January 12, 2026, doi:10.1101/gr.281042.125
      OPEN ACCESS ARTICLE

N

  1. Niu, Mengting

    • EnDeep4mC predicts DNA N4-methylcytosine sites using a dual-adaptive feature encoding framework in deep ensembles Genome Res. March 2026 36: 589-599; Published in Advance February 17, 2026, doi:10.1101/gr.280977.125
      OPEN ACCESS ARTICLE

O

  1. Orengo, Christine A.

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

P

  1. Pang, Camilla S.M.

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

  2. Pantalacci, Sophie

  3. Pariyachery, Sharika

  4. Pastinen, Tomi

    • Read-level genotyping of short tandem repeats using long reads and single-nucleotide variation with STRkit Genome Res. March 2026 36: 578-588; Published in Advance January 15, 2026, doi:10.1101/gr.280766.125
    • Erratum: Expanded methylome and quantitative trait loci detection by long-read profiling of personal DNA Genome Res. March 2026 36: 660; doi:10.1101/gr.281963.126
      OPEN ACCESS ARTICLE

  5. Paulin, Luis F.

  6. Pieper, Andrew A.

    • Cell type–specific gene regulatory atlas prioritizes drug targets and repurposable medicines in Alzheimer's disease Genome Res. March 2026 36: 645-659; Published in Advance January 21, 2026, doi:10.1101/gr.280436.125
      OPEN ACCESS ARTICLE

  7. Pilar García Guerreiro, María

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  8. Pinter, Stefan F.

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  9. Piszka, Zofia

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

  10. Pulaski, Lukasz

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  11. Purohit, Shilp

Q

  1. Qiao, Lu

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  2. Quilez, Javier

R

  1. Ratajewski, Marcin

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  2. Ren, Yunxiao

    • Cell type–specific gene regulatory atlas prioritizes drug targets and repurposable medicines in Alzheimer's disease Genome Res. March 2026 36: 645-659; Published in Advance January 21, 2026, doi:10.1101/gr.280436.125
      OPEN ACCESS ARTICLE

  3. Rey, Carine

S

  1. Saad, Abdelrahman Ahmed Yehia Abdelaziz

  2. Sabot, Francois

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  3. Sanio, Philippe

  4. Sedlazeck, Fritz J.

  5. Sémon, Marie

  6. Sheltzer, Jason M.

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  7. Shemirani, Ruhollah

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  8. Singh, Karan

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  9. Siqueira de Oliveira, Daniel

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  10. Soliman, Omar

  11. Stalin, Antony

    • EnDeep4mC predicts DNA N4-methylcytosine sites using a dual-adaptive feature encoding framework in deep ensembles Genome Res. March 2026 36: 589-599; Published in Advance February 17, 2026, doi:10.1101/gr.280977.125
      OPEN ACCESS ARTICLE

  12. Studzian, Maciej

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  13. Swanton, Charles

    • Gene duplication is associated with gene diversification and potential neofunctionalization in lung cancer evolution Genome Res. March 2026 36: 561-577; Published in Advance February 19, 2026, doi:10.1101/gr.278663.123
      OPEN ACCESS ARTICLE

T

  1. Thompson, Sarah L.

    • Chromosome engineering to correct a complex rearrangement on Chromosome 8 reveals the effects of 8p syndrome on gene expression and neural differentiation Genome Res. March 2026 36: 547-560; Published in Advance January 12, 2026, doi:10.1101/gr.280425.125

  2. Thulasidharan, Nitu

V

  1. van Werven, Folkert J.

  2. Vieira, Cristina

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  3. Vilas Boas Nunes, William

    • Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125

  4. Vivori, Claudia

W

  1. Williams, Moli

    • A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
      OPEN ACCESS ARTICLE

  2. Wu, Haiguo

X

  1. Xie, Dongying

    • Pangenome analysis reveals families of ubiquitin-ligase adaptors as key genomic divergence drivers that lead to hybrid incompatibility Genome Res. March 2026 36: 506-521; Published in Advance February 17, 2026, doi:10.1101/gr.280885.125

  2. Xu, Zhou

Y

  1. Yates, Josephine

  2. Ye, Pohao

    • Pangenome analysis reveals families of ubiquitin-ligase adaptors as key genomic divergence drivers that lead to hybrid incompatibility Genome Res. March 2026 36: 506-521; Published in Advance February 17, 2026, doi:10.1101/gr.280885.125

Z

  1. Zaitlen, Noah

    • A spectral component approach leveraging identity-by-descent graphs to address recent population structure in genomic analysis Genome Res. March 2026 36: 534-546; Published in Advance December 23, 2025, doi:10.1101/gr.280659.125
      OPEN ACCESS ARTICLE

  2. Zhang, Lin

    • Early feature extraction drives model performance in high-resolution chromatin accessibility prediction Genome Res. March 2026 36: 619-629; Published in Advance January 12, 2026, doi:10.1101/gr.281042.125
      OPEN ACCESS ARTICLE

  3. Zhang, Shuyu

    • EnDeep4mC predicts DNA N4-methylcytosine sites using a dual-adaptive feature encoding framework in deep ensembles Genome Res. March 2026 36: 589-599; Published in Advance February 17, 2026, doi:10.1101/gr.280977.125
      OPEN ACCESS ARTICLE

  4. Zhao, Zhongying

    • Pangenome analysis reveals families of ubiquitin-ligase adaptors as key genomic divergence drivers that lead to hybrid incompatibility Genome Res. March 2026 36: 506-521; Published in Advance February 17, 2026, doi:10.1101/gr.280885.125

  5. Zou, Quan

    • EnDeep4mC predicts DNA N4-methylcytosine sites using a dual-adaptive feature encoding framework in deep ensembles Genome Res. March 2026 36: 589-599; Published in Advance February 17, 2026, doi:10.1101/gr.280977.125
      OPEN ACCESS ARTICLE

  6. Zvereff, Val

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