Combining DNA and protein alignments to improve genome annotation with LiftOn

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Figure 3.
Figure 3.

Plot illustrating the locations of extra gene copies found on T2T-CHM13 (left side) compared to GRCh38 (right side). The Circos plot was generated using pyCircos (https://github.com/ponnhide/pyCircos). Each line represents a gene copy mapped from the reference genome to the target genome, with colors indicating different chromosomes. The lines are color-coded by the chromosome of the original copy. The bands within the plot are sized proportionally to reflect the actual size of these chromosomes.

This Article

  1. Genome Res. 35: 311-325

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