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Table of Contents
June 2018; 28 (6)
In memoriam
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John Sulston (1942–2018)
Robert H. Waterston
Genome Res.
June 2018
28
:
ix
-
x
;
doi:
10.1101/gr.238741.118
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Research
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The peopling of South America and the trans-Andean gene flow of the first settlers
Alberto Gómez-Carballa
,
Jacobo Pardo-Seco
,
Stefania Brandini
,
Alessandro Achilli
,
Ugo A. Perego
,
Michael D. Coble
,
Toni M. Diegoli
,
Vanesa Álvarez-Iglesias
,
Federico Martinón-Torres
,
Anna Olivieri
,
Antonio Torroni
,
and
Antonio Salas
Genome Res.
June 2018
28
:
767
-
779
;
Published in Advance
May 7, 2018
,
doi:
10.1101/gr.234674.118
Abstract
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Supplemental Material
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Evaluating recovery potential of the northern white rhinoceros from cryopreserved somatic cells
Tate Tunstall
,
Richard Kock
,
Jiri Vahala
,
Mark Diekhans
,
Ian Fiddes
,
Joel Armstrong
,
Benedict Paten
,
Oliver A. Ryder
,
and
Cynthia C. Steiner
Genome Res.
June 2018
28
:
780
-
788
;
Published in Advance
May 24, 2018
,
doi:
10.1101/gr.227603.117
Abstract
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Birth, evolution, and transmission of satellite-free mammalian centromeric domains
Solomon G. Nergadze
,
Francesca M. Piras
,
Riccardo Gamba
,
Marco Corbo
,
Federico Cerutti
,
Joseph G.W. McCarter
,
Eleonora Cappelletti
,
Francesco Gozzo
,
Rebecca M. Harman
,
Douglas F. Antczak
,
Donald Miller
,
Maren Scharfe
,
Giulio Pavesi
,
Elena Raimondi
,
Kevin F. Sullivan
,
and
Elena Giulotto
Genome Res.
June 2018
28
:
789
-
799
;
Published in Advance
April 30, 2018
,
doi:
10.1101/gr.231159.117
Abstract
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Allele-specific control of replication timing and genome organization during development
Juan Carlos Rivera-Mulia
,
Andrew Dimond
,
Daniel Vera
,
Claudia Trevilla-Garcia
,
Takayo Sasaki
,
Jared Zimmerman
,
Catherine Dupont
,
Joost Gribnau
,
Peter Fraser
,
and
David M. Gilbert
Genome Res.
June 2018
28
:
800
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811
;
Published in Advance
May 7, 2018
,
doi:
10.1101/gr.232561.117
Abstract
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RNA editing in nascent RNA affects pre-mRNA splicing
Yun-Hua Esther Hsiao
,
Jae Hoon Bahn
,
Yun Yang
,
Xianzhi Lin
,
Stephen Tran
,
Ei-Wen Yang
,
Giovanni Quinones-Valdez
,
and
Xinshu Xiao
Genome Res.
June 2018
28
:
812
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823
;
Published in Advance
May 3, 2018
,
doi:
10.1101/gr.231209.117
Abstract
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OPEN ACCESS ARTICLE
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Molecular dissection of a natural transposable element invasion
Robert Kofler
,
Kirsten-André Senti
,
Viola Nolte
,
Ray Tobler
,
and
Christian Schlötterer
Genome Res.
June 2018
28
:
824
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835
;
Published in Advance
April 30, 2018
,
doi:
10.1101/gr.228627.117
Abstract
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The HUSH complex cooperates with TRIM28 to repress young retrotransposons and new genes
Luisa Robbez-Masson
,
Christopher H.C. Tie
,
Lucia Conde
,
Hale Tunbak
,
Connor Husovsky
,
Iva A. Tchasovnikarova
,
Richard T. Timms
,
Javier Herrero
,
Paul J. Lehner
,
and
Helen M. Rowe
Genome Res.
June 2018
28
:
836
-
845
;
Published in Advance
May 4, 2018
,
doi:
10.1101/gr.228171.117
Abstract
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A CRISPR knockout screen identifies SETDB1-target retroelement silencing factors in embryonic stem cells
Kei Fukuda
,
Akihiko Okuda
,
Kosuke Yusa
,
and
Yoichi Shinkai
Genome Res.
June 2018
28
:
846
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858
;
Published in Advance
May 4, 2018
,
doi:
10.1101/gr.227280.117
Abstract
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Methods
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Arrayed CRISPR screen with image-based assay reliably uncovers host genes required for coxsackievirus infection
Heon Seok Kim
,
Kyungjin Lee
,
Seong-Jun Kim
,
Sungchan Cho
,
Hye Jin Shin
,
Chonsaeng Kim
,
and
Jin-Soo Kim
Genome Res.
June 2018
28
:
859
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868
;
Published in Advance
April 30, 2018
,
doi:
10.1101/gr.230250.117
Abstract
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Comprehensive viral enrichment enables sensitive respiratory virus genomic identification and analysis by next generation sequencing
Brigid M. O'Flaherty
,
Yan Li
,
Ying Tao
,
Clinton R. Paden
,
Krista Queen
,
Jing Zhang
,
Darrell L. Dinwiddie
,
Stephen M. Gross
,
Gary P. Schroth
,
and
Suxiang Tong
Genome Res.
June 2018
28
:
869
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877
;
Published in Advance
April 27, 2018
,
doi:
10.1101/gr.226316.117
Abstract
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bigSCale: an analytical framework for big-scale single-cell data
Giovanni Iacono
,
Elisabetta Mereu
,
Amy Guillaumet-Adkins
,
Roser Corominas
,
Ivon Cuscó
,
Gustavo Rodríguez-Esteban
,
Marta Gut
,
Luis Alberto Pérez-Jurado
,
Ivo Gut
,
and
Holger Heyn
Genome Res.
June 2018
28
:
878
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890
;
Published in Advance
May 3, 2018
,
doi:
10.1101/gr.230771.117
Abstract
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OPEN ACCESS ARTICLE
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A novel
k
-mer set memory (KSM) motif representation improves regulatory variant prediction
Yuchun Guo
,
Kevin Tian
,
Haoyang Zeng
,
Xiaoyun Guo
,
and
David Kenneth Gifford
Genome Res.
June 2018
28
:
891
-
900
;
Published in Advance
April 13, 2018
,
doi:
10.1101/gr.226852.117
Abstract
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Detection and analysis of ancient segmental duplications in mammalian genomes
Lianrong Pu
,
Yu Lin
,
and
Pavel A. Pevzner
Genome Res.
June 2018
28
:
901
-
909
;
Published in Advance
May 7, 2018
,
doi:
10.1101/gr.228718.117
Abstract
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Inversion variants in human and primate genomes
Claudia Rita Catacchio
,
Flavia Angela Maria Maggiolini
,
Pietro D'Addabbo
,
Miriana Bitonto
,
Oronzo Capozzi
,
Martina Lepore Signorile
,
Mattia Miroballo
,
Nicoletta Archidiacono
,
Evan E. Eichler
,
Mario Ventura
,
and
Francesca Antonacci
Genome Res.
June 2018
28
:
910
-
920
;
Published in Advance
May 18, 2018
,
doi:
10.1101/gr.234831.118
Abstract
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A comparative transcriptional landscape of maize and sorghum obtained by single-molecule sequencing
Bo Wang
,
Michael Regulski
,
Elizabeth Tseng
,
Andrew Olson
,
Sara Goodwin
,
W. Richard McCombie
,
and
Doreen Ware
Genome Res.
June 2018
28
:
921
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932
;
Published in Advance
April 30, 2018
,
doi:
10.1101/gr.227462.117
Abstract
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This Issue
June 2018;
28
(6)
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In memoriam
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