Volume 26, Issue 6 | June 2016

Research
- - Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
    Phillippa C. Taberlay
    Joanna Achinger-Kawecka
    Aaron T.L. Lun
    Fabian A. Buske
    Kenneth Sabir
    Cathryn M. Gould Elena Zotenko Saul A. Bert Katherine A. Giles Denis C. Bauer
    ...[+5 authors]...,
    Gordon K. Smyth
    Clare Stirzaker
    Sean I. O'Donoghue
    Susan J. Clark
    First Published April 6, 2016
  - Large-scale analysis of genome and transcriptome alterations in multiple tumors unveils novel cancer-relevant splicing networks
    Endre Sebestyén
    Babita Singh
    Belén Miñana
    Amadís Pagès
    Francesca Mateo
    First Published April 13, 2016
  - A hot L1 retrotransposon evades somatic repression and initiates human colorectal cancer
    Emma C. Scott
    Eugene J. Gardner
    Ashiq Masood
    Nelson T. Chuang
    Paula M. Vertino
    First Published May 10, 2016
  - Pervasive polymorphic imprinted methylation in the human placenta
    Courtney W. Hanna
    Maria S. Peñaherrera
    Heba Saadeh
    Simon Andrews
    Deborah E. McFadden
    First Published January 14, 2016
  - Impact of the X Chromosome and sex on regulatory variation
    Kimberly R. Kukurba
    Princy Parsana
    Brunilda Balliu
    Kevin S. Smith
    Zachary Zappala
    David A. Knowles Marie-Julie Favé Joe R. Davis Xin Li Xiaowei Zhu James B. Potash Myrna M. Weissman Jianxin Shi Anshul Kundaje Douglas F. Levinson
    ...[+10 authors]...,
    Philip Awadalla
    Sara Mostafavi
    Alexis Battle
    Stephen B. Montgomery
    First Published April 21, 2016
  - Interactions between pluripotency factors specify cis-regulation in embryonic stem cells
    Chris Fiore
    Barak A. Cohen
    First Published April 15, 2016
  - Evidence for the fixation of gene duplications by positive selection in Drosophila
    Margarida Cardoso-Moreira
    J. Roman Arguello
    Srikanth Gottipati
    L.G. Harshman
    Jennifer K. Grenier
    First Published April 12, 2016
  - Divergence of a conserved elongation factor and transcription regulation in budding and fission yeast
    Gregory T. Booth
    Isabel X. Wang
    Vivian G. Cheung
    John T. Lis
    First Published May 12, 2016
  - Venus flytrap carnivorous lifestyle builds on herbivore defense strategies
    Felix Bemm
    Dirk Becker
    Christina Larisch
    Ines Kreuzer
    Maria Escalante-Perez
    Waltraud X. Schulze Markus Ankenbrand Anna-Lena Van de Weyer Elzbieta Krol Khaled A. Al-Rasheid
    ...[+5 authors]...,
    Axel Mithöfer
    Andreas P. Weber
    Jörg Schultz
    Rainer Hedrich
    First Published May 4, 2016
  - Evolutionary assembly patterns of prokaryotic genomes
    Maximilian O. Press
    Christine Queitsch
    Elhanan Borenstein
    First Published April 14, 2016
Methods
- - A flexible method for estimating the fraction of fitness influencing mutations from large sequencing data sets
    Sunjin Moon
    Joshua M. Akey
    First Published April 14, 2016
  - SMASH, a fragmentation and sequencing method for genomic copy number analysis
    Zihua Wang
    Peter Andrews
    Jude Kendall
    Beicong Ma
    Inessa Hakker
    First Published April 14, 2016
Resource
- - Identification of the long, edited dsRNAome of LPS-stimulated immune cells
    Matthew G. Blango
    Brenda L. Bass
    First Published April 21, 2016

Table of Contents

Volume 26, Issue 6 | June 2016

Research

Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations

Large-scale analysis of genome and transcriptome alterations in multiple tumors unveils novel cancer-relevant splicing networks

A hot L1 retrotransposon evades somatic repression and initiates human colorectal cancer

Pervasive polymorphic imprinted methylation in the human placenta

Impact of the X Chromosome and sex on regulatory variation

Interactions between pluripotency factors specify cis-regulation in embryonic stem cells

Evidence for the fixation of gene duplications by positive selection in Drosophila

Divergence of a conserved elongation factor and transcription regulation in budding and fission yeast

Venus flytrap carnivorous lifestyle builds on herbivore defense strategies

Evolutionary assembly patterns of prokaryotic genomes

Methods

A flexible method for estimating the fraction of fitness influencing mutations from large sequencing data sets

SMASH, a fragmentation and sequencing method for genomic copy number analysis

Resource

Identification of the long, edited dsRNAome of LPS-stimulated immune cells

Table of Contents

Volume 26, Issue 6 | June 2016

Share this issue

Research

Methods

Resource