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Research

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  BRF1 mutations alter RNA polymerase III–dependent transcription and cause neurodevelopmental anomalies

  • Guntram Borck,
  • Friederike Hög,
  • Maria Lisa Dentici,
  • Perciliz L. Tan,
  • Nadine Sowada,
  • Ana Medeira,
  • Lucie Gueneau,
  • Holger Thiele,
  • Maria Kousi,
  • Francesca Lepri,
  • Larissa Wenzeck,
  • Ian Blumenthal,
  • Antonio Radicioni,
  • Tito Livio Schwarzenberg,
  • Barbara Mandriani,
  • Rita Fischetto,
  • Deborah J. Morris-Rosendahl,
  • Janine Altmüller,
  • Alexandre Reymond,
  • Peter Nürnberg,
  • Giuseppe Merla,
  • Bruno Dallapiccola,
  • Nicholas Katsanis,
  • Patrick Cramer,
  • and Christian Kubisch

  Genome Res. February 2015 25: 155-166; Published in Advance January 5, 2015, doi:10.1101/gr.176925.114
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  Decoupling of evolutionary changes in transcription factor binding and gene expression in mammals

  • Emily S. Wong,
  • David Thybert,
  • Bianca M. Schmitt,
  • Klara Stefflova,
  • Duncan T. Odom,
  • and Paul Flicek

  Genome Res. February 2015 25: 167-178; Published in Advance November 13, 2014, doi:10.1101/gr.177840.114
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  TP53 engagement with the genome occurs in distinct local chromatin environments via pioneer factor activity

  • Morgan A. Sammons,
  • Jiajun Zhu,
  • Adam M. Drake,
  • and Shelley L. Berger

  Genome Res. February 2015 25: 179-188; Published in Advance November 12, 2014, doi:10.1101/gr.181883.114
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  Large transcription units unify copy number variants and common fragile sites arising under replication stress

  • Thomas E. Wilson,
  • Martin F. Arlt,
  • So Hae Park,
  • Sountharia Rajendran,
  • Michelle Paulsen,
  • Mats Ljungman,
  • and Thomas W. Glover

  Genome Res. February 2015 25: 189-200; Published in Advance November 4, 2014, doi:10.1101/gr.177121.114
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  A novel role for the Pol I transcription factor UBTF in maintaining genome stability through the regulation of highly transcribed Pol II genes

  • Elaine Sanij,
  • Jeannine Diesch,
  • Analia Lesmana,
  • Gretchen Poortinga,
  • Nadine Hein,
  • Grace Lidgerwood,
  • Donald P. Cameron,
  • Jason Ellul,
  • Gregory J. Goodall,
  • Lee H. Wong,
  • Amardeep S. Dhillon,
  • Nourdine Hamdane,
  • Lawrence I. Rothblum,
  • Richard B. Pearson,
  • Izhak Haviv,
  • Tom Moss,
  • and Ross D. Hannan

  Genome Res. February 2015 25: 201-212; Published in Advance December 1, 2014, doi:10.1101/gr.176115.114
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  Genome accessibility is widely preserved and locally modulated during mitosis

  • Chris C.-S. Hsiung,
  • Christapher S. Morrissey,
  • Maheshi Udugama,
  • Christopher L. Frank,
  • Cheryl A. Keller,
  • Songjoon Baek,
  • Belinda Giardine,
  • Gregory E. Crawford,
  • Myong-Hee Sung,
  • Ross C. Hardison,
  • and Gerd A. Blobel

  Genome Res. February 2015 25: 213-225; Published in Advance November 4, 2014, doi:10.1101/gr.180646.114
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  Violation of the 12/23 rule of genomic V(D)J recombination is common in lymphocytes

  • Nicholas J. Parkinson,
  • Matthew Roddis,
  • Ben Ferneyhough,
  • Gang Zhang,
  • Adam J. Marsden,
  • Siarhei Maslau,
  • Yasmin Sanchez-Pearson,
  • Thomas Barthlott,
  • Ian R. Humphreys,
  • Kristin Ladell,
  • David A. Price,
  • Chris P. Ponting,
  • Georg Hollander,
  • and Michael D. Fischer

  Genome Res. February 2015 25: 226-234; Published in Advance November 3, 2014, doi:10.1101/gr.179770.114
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  Detection of Pol IV/RDR2-dependent transcripts at the genomic scale in Arabidopsis reveals features and regulation of siRNA biogenesis

  • Shaofang Li,
  • Lee E. Vandivier,
  • Bin Tu,
  • Lei Gao,
  • So Youn Won,
  • Shengben Li,
  • Binglian Zheng,
  • Brian D. Gregory,
  • and Xuemei Chen

  Genome Res. February 2015 25: 235-245; Published in Advance November 20, 2014, doi:10.1101/gr.182238.114
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  Genome-wide analysis of local chromatin packing in Arabidopsis thaliana

  • Congmao Wang,
  • Chang Liu,
  • Damian Roqueiro,
  • Dominik Grimm,
  • Rebecca Schwab,
  • Claude Becker,
  • Christa Lanz,
  • and Detlef Weigel

  Genome Res. February 2015 25: 246-256; Published in Advance November 3, 2014, doi:10.1101/gr.170332.113
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