Table of Contents

Methods

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Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
- Nadin Rohland and
- David Reich
Genome Res. May 2012 22: 939-946; Published in Advance January 20, 2012, doi:10.1101/gr.128124.111
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Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals
- Hidenori Tani,
- Rena Mizutani,
- Kazi Abdus Salam,
- Keiko Tano,
- Kenichi Ijiri,
- Ai Wakamatsu,
- Takao Isogai,
- Yutaka Suzuki,
- and Nobuyoshi Akimitsu
Genome Res. May 2012 22: 947-956; Published in Advance February 27, 2012, doi:10.1101/gr.130559.111
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Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA
- Pavel P. Khil,
- Fatima Smagulova,
- Kevin M. Brick,
- R. Daniel Camerini-Otero,
- and Galina V. Petukhova
Genome Res. May 2012 22: 957-965; Published in Advance February 24, 2012, doi:10.1101/gr.130583.111
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Joint genotyping on the fly: Identifying variation among a sequenced panel of inbred lines
- Eric A. Stone
Genome Res. May 2012 22: 966-974; Published in Advance February 23, 2012, doi:10.1101/gr.129122.111
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Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis
- Steve Swinnen,
- Kristien Schaerlaekens,
- Thiago Pais,
- Jürgen Claesen,
- Georg Hubmann,
- Yudi Yang,
- Mekonnen Demeke,
- María R. Foulquié-Moreno,
- Annelies Goovaerts,
- Kris Souvereyns,
- Lieven Clement,
- Françoise Dumortier,
- and Johan M. Thevelein
Genome Res. May 2012 22: 975-984; Published in Advance March 7, 2012, doi:10.1101/gr.131698.111
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A high-coverage artificial chromosome library for the genome-wide screening of drug-resistance genes in malaria parasites
- Shiroh Iwanaga,
- Izumi Kaneko,
- and Masao Yuda
Genome Res. May 2012 22: 985-992; Published in Advance March 16, 2012, doi:10.1101/gr.124164.111

Research

Rapid coastal spread of First Americans: Novel insights from South America's Southern Cone mitochondrial genomes

Reconstructing ancient mitochondrial DNA links between Africa and Europe

Human postmeiotic sex chromatin and its impact on sex chromosome evolution

A DNA hypermethylation module for the stem/progenitor cell signature of cancer

Temporal shifts in the skin microbiome associated with disease flares and treatment in children with atopic dermatitis

Effects of sequence variation on differential allelic transcription factor occupancy and gene expression

Mouse endogenous retroviruses can trigger premature transcriptional termination at a distance

Genome-wide analysis of long noncoding RNA stability

Identification of copy number variants in horses

Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments

Transcriptional variation in the malaria parasite Plasmodium falciparum

Methods

Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture

Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals

Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA

Joint genotyping on the fly: Identifying variation among a sequenced panel of inbred lines

Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis

A high-coverage artificial chromosome library for the genome-wide screening of drug-resistance genes in malaria parasites

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