Table of Contents

August 2007; 17 (8)

ARTICLE

  • A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids

    • Daria V. Babushok,
    • Kazuhiko Ohshima,
    • Eric M. Ostertag,
    • Xinsheng Chen,
    • Yanfeng Wang,
    • Prabhat K. Mandal,
    • Norihiro Okada,
    • Charles S. Abrams,
    • and Haig H. Kazazian, Jr.
    Genome Res. August 2007 17: 1129-1138; Published in Advance July 10, 2007, doi:10.1101/gr.6252107

LETTERS

  • Functional persistence of exonized mammalian-wide interspersed repeat elements (MIRs)

    • Maren Krull,
    • Mirjan Petrusma,
    • Wojciech Makalowski,
    • Jürgen Brosius,
    • and Jürgen Schmitz
    Genome Res. August 2007 17: 1139-1145; Published in Advance July 10, 2007, doi:10.1101/gr.6320607

  • Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere

    • Lee H. Wong,
    • Kate H. Brettingham-Moore,
    • Lyn Chan,
    • Julie M. Quach,
    • Melissa A. Anderson,
    • Emma L. Northrop,
    • Ross Hannan,
    • Richard Saffery,
    • Margaret L. Shaw,
    • Evan Williams,
    • and K.H. Andy Choo
    Genome Res. August 2007 17: 1146-1160; Published in Advance July 10, 2007, doi:10.1101/gr.6022807
    OPEN ACCESS ARTICLE

  • Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors

    • Daryi Wang,
    • Huang-Mo Sung,
    • Tzi-Yuan Wang,
    • Chih-Jen Huang,
    • Peggy Yang,
    • Tiffany Chang,
    • Yang-Chao Wang,
    • Da-Lun Tseng,
    • Jen-Pey Wu,
    • Tso-Ching Lee,
    • Ming-Che Shih,
    • and Wen-Hsiung Li
    Genome Res. August 2007 17: 1161-1169; Published in Advance July 5, 2007, doi:10.1101/gr.6328907

  • Nucleosome positioning signals in genomic DNA

    • Heather E. Peckham,
    • Robert E. Thurman,
    • Yutao Fu,
    • John A. Stamatoyannopoulos,
    • William Stafford Noble,
    • Kevin Struhl,
    • and Zhiping Weng
    Genome Res. August 2007 17: 1170-1177; Published in Advance July 9, 2007, doi:10.1101/gr.6101007

  • Reconstructing the ancestor of Mycobacterium leprae: The dynamics of gene loss and genome reduction

    • Laura Gómez-Valero,
    • Eduardo P.C. Rocha,
    • Amparo Latorre,
    • and Francisco J. Silva
    Genome Res. August 2007 17: 1178-1185; Published in Advance July 10, 2007, doi:10.1101/gr.6360207

  • HIV integration site selection: Analysis by massively parallel pyrosequencing reveals association with epigenetic modifications

    • Gary P. Wang,
    • Angela Ciuffi,
    • Jeremy Leipzig,
    • Charles C. Berry,
    • and Frederic D. Bushman
    Genome Res. August 2007 17: 1186-1194; Published in Advance June 1, 2007, doi:10.1101/gr.6286907

Methods

  • Characterization of mutation spectra with ultra-deep pyrosequencing: Application to HIV-1 drug resistance

    • Chunlin Wang,
    • Yumi Mitsuya,
    • Baback Gharizadeh,
    • Mostafa Ronaghi,
    • and Robert W. Shafer
    Genome Res. August 2007 17: 1195-1201; Published in Advance June 28, 2007, doi:10.1101/gr.6468307
    OPEN ACCESS ARTICLE

  • Calling cards for DNA-binding proteins

    • Haoyi Wang,
    • Mark Johnston,
    • and Robi David Mitra
    Genome Res. August 2007 17: 1202-1209; Published in Advance July 10, 2007, doi:10.1101/gr.6510207

  • Heritability of alternative splicing in the human genome

    • Tony Kwan,
    • David Benovoy,
    • Christel Dias,
    • Scott Gurd,
    • David Serre,
    • Harry Zuzan,
    • Tyson A. Clark,
    • Anthony Schweitzer,
    • Michelle K. Staples,
    • Hui Wang,
    • John E. Blume,
    • Thomas J. Hudson,
    • Rob Sladek,
    • and Jacek Majewski
    Genome Res. August 2007 17: 1210-1218; doi:10.1101/gr.6281007

  • Recombination rate estimation in the presence of hotspots

    • Adam Auton and
    • Gil McVean
    Genome Res. August 2007 17: 1219-1227; Published in Advance July 10, 2007, doi:10.1101/gr.6386707

RESOURCES

  • Detecting genetic variation in microarray expression data

    • Jennifer A. Greenhall,
    • Matthew A. Zapala,
    • Mario Cáceres,
    • Ondrej Libiger,
    • Carrolee Barlow,
    • Nicholas J. Schork,
    • and David J. Lockhart
    Genome Res. August 2007 17: 1228-1235; Published in Advance July 3, 2007, doi:10.1101/gr.6307307

  • Temporal and spatial transcriptional profiles of aging in Drosophila melanogaster

    • Ming Zhan,
    • Haruyoshi Yamaza,
    • Yu Sun,
    • Jason Sinclair,
    • Huai Li,
    • and Sige Zou
    Genome Res. August 2007 17: 1236-1243; Published in Advance July 10, 2007, doi:10.1101/gr.6216607

ERRATUM

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This Issue

August 2007; 17 (8)
Cover
  1. ARTICLE
  2. LETTERS
  3. Methods
  4. RESOURCES
  5. ERRATUM

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