Volume 16, Issue 9 | September 2006

LETTERS
- - Human embryonic stem cells have a unique epigenetic signature
    Marina Bibikova
    Eugene Chudin
    Bonnie Wu
    Lixin Zhou
    Eliza Wickham Garcia
    Ying Liu Soojung Shin Todd W. Plaia Jonathan M. Auerbach Dan E. Arking Rodolfo Gonzalez Jeremy Crook Bruce Davidson Thomas C. Schulz Allan Robins Aparna Khanna Peter Sartipy Johan Hyllner Padmavathy Vanguri Smita Savant-Bhonsale Alan K. Smith Aravinda Chakravarti Anirban Maitra
    ...[+18 authors]...,
    Mahendra Rao
    David L. Barker
    Jeanne F. Loring
    Jian-Bing Fan
    First Published August 9, 2006
  - An ~140-kb deletion associated with feline spinal muscular atrophy implies an essential LIX1 function for motor neuron survival
    John C. Fyfe
    Marilyn Menotti-Raymond
    Victor A. David
    Lars Brichta
    Alejandro A. Schäffer
    Richa Agarwala William J. Murphy William J. Wedemeyer Brittany L. Gregory
    ...[+4 authors]...,
    Bethany G. Buzzell
    Meghan C. Drummond
    Brunhilde Wirth
    Stephen J. O'Brien
    First Published August 9, 2006
  - Phylogenetic analyses of cyanobacterial genomes: Quantification of horizontal gene transfer events
    Olga Zhaxybayeva
    J. Peter Gogarten
    Robert L. Charlebois
    W. Ford Doolittle
    R. Thane Papke
    First Published August 9, 2006
  - Hemizygous subtelomeres of an African trypanosome chromosome may account for over 75% of chromosome length
    Sergio Callejas
    Vanessa Leech
    Christopher Reitter
    Sara Melville
    First Published August 9, 2006
  - Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii
    Asis Khan
    Ulrike Böhme
    Krystyna A. Kelly
    Ellen Adlem
    Karen Brooks
    Mark Simmonds Karen Mungall Michael A. Quail Claire Arrowsmith Tracey Chillingworth Carol Churcher David Harris Matthew Collins Nigel Fosker Audrey Fraser Zahra Hance Kay Jagels Sharon Moule Lee Murphy Susan O'Neil Marie-Adele Rajandream David Saunders Kathy Seeger Sally Whitehead Thomas Mayr Xuenan Xuan Junichi Watanabe Yutaka Suzuki Hiroyuki Wakaguri Sumio Sugano Chihiro Sugimoto Ian Paulsen Aaron J. Mackey David S. Roos Neil Hall
    ...[+30 authors]...,
    Matthew Berriman
    Bart Barrell
    L. David Sibley
    James W. Ajioka
    First Published August 10, 2006
Methods
- - Predicting essential genes in fungal genomes
    Michael Seringhaus
    Alberto Paccanaro
    Anthony Borneman
    Michael Snyder
    Mark Gerstein
    First Published August 9, 2006
  - High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping
    Daniel A. Peiffer
    Jennie M. Le
    Frank J. Steemers
    Weihua Chang
    Tony Jenniges
    Francisco Garcia Kirt Haden Jiangzhen Li Chad A. Shaw John Belmont
    ...[+5 authors]...,
    Sau Wai Cheung
    Richard M. Shen
    David L. Barker
    Kevin L. Gunderson
    First Published August 9, 2006
  - STAC: A method for testing the significance of DNA copy number aberrations across multiple array-CGH experiments
    Sharon J. Diskin
    Thomas Eck
    Joel Greshock
    Yael P. Mosse
    Tara Naylor
    First Published August 9, 2006
  - SyMAP: A system for discovering and viewing syntenic regions of FPC maps
    Carol Soderlund
    William Nelson
    Austin Shoemaker
    Andrew Paterson
    First Published September 1, 2006
  - Græmlin: General and robust alignment of multiple large interaction networks
    Jason Flannick
    Antal Novak
    Balaji S. Srinivasan
    Harley H. McAdams
    Serafim Batzoglou
    First Published August 9, 2006
RESOURCE
- - An initial map of insertion and deletion (INDEL) variation in the human genome
    Ryan E. Mills
    Christopher T. Luttig
    Christine E. Larkins
    Adam Beauchamp
    Circe Tsui
    First Published August 10, 2006

Table of Contents

Volume 16, Issue 9 | September 2006

LETTERS

Human embryonic stem cells have a unique epigenetic signature

An ~140-kb deletion associated with feline spinal muscular atrophy implies an essential LIX1 function for motor neuron survival

Phylogenetic analyses of cyanobacterial genomes: Quantification of horizontal gene transfer events

Hemizygous subtelomeres of an African trypanosome chromosome may account for over 75% of chromosome length

Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii

Methods

Predicting essential genes in fungal genomes

High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping

STAC: A method for testing the significance of DNA copy number aberrations across multiple array-CGH experiments

SyMAP: A system for discovering and viewing syntenic regions of FPC maps

Græmlin: General and robust alignment of multiple large interaction networks

RESOURCE

An initial map of insertion and deletion (INDEL) variation in the human genome

Table of Contents

Volume 16, Issue 9 | September 2006

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LETTERS

Methods

RESOURCE