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Table of Contents
April 2005; 15 (4)
In This Issue
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Flower Power
Hillary E. Sussman
Genome Res.
April 2005
15
:
453
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ARTICLES
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The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern
Francisco M. De La Vega
,
Hadar Isaac
,
Andrew Collins
,
Charles R. Scafe
,
Bjarni V. Halldórsson
,
Xiaoping Su
,
Ross A. Lippert
,
Yu Wang
,
Marion Laig-Webster
,
Ryan T. Koehler
,
Janet S. Ziegle
,
Lewis T. Wogan
,
Junko F. Stevens
,
Kyle M. Leinen
,
Sheri J. Olson
,
Karl J. Guegler
,
Xiaoqing You
,
Lily H. Xu
,
Heinz G. Hemken
,
Francis Kalush
,
Mitsuo Itakura
,
Yi Zheng
,
Guy de Thé
,
Stephen J. O'Brien
,
Andrew G. Clark
,
Sorin Istrail
,
Michael W. Hunkapiller
,
Eugene G. Spier
,
and
Dennis A. Gilbert
Genome Res.
April 2005
15
:
454
-
462
;
Published in Advance
March 21, 2005
,
doi:
10.1101/gr.3241705
Abstract
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OPEN ACCESS ARTICLE
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Disclosing hidden transcripts: Mouse natural sense–antisense transcripts tend to be poly(A) negative and nuclear localized
Hidenori Kiyosawa
,
Nathan Mise
,
Shigeru Iwase
,
Yoshihide Hayashizaki
,
and
Kuniya Abe
Genome Res.
April 2005
15
:
463
-
474
;
Published in Advance
March 21, 2005
,
doi:
10.1101/gr.3155905
Abstract
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Analysis of the floral transcriptome uncovers new regulators of organ determination and gene families related to flower organ differentiation in
Gerbera hybrida
(Asteraceae)
Roosa A.E. Laitinen
,
Juha Immanen
,
Petri Auvinen
,
Stephen Rudd
,
Edward Alatalo
,
Lars Paulin
,
Miia Ainasoja
,
Mika Kotilainen
,
Satu Koskela
,
Teemu H. Teeri
,
and
Paula Elomaa
Genome Res.
April 2005
15
:
475
-
486
;
Published in Advance
March 21, 2005
,
doi:
10.1101/gr.3043705
Abstract
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LETTERS
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Whole genome shotgun sequencing of
Brassica oleracea
and its application to gene discovery and annotation in
Arabidopsis
Mulu Ayele
,
Brian J. Haas
,
Nikhil Kumar
,
Hank Wu
,
Yongli Xiao
,
Susan Van Aken
,
Teresa R. Utterback
,
Jennifer R. Wortman
,
Owen R. White
,
and
Christopher D. Town
Genome Res.
April 2005
15
:
487
-
495
;
doi:
10.1101/gr.3176505
Abstract
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Comparing low coverage random shotgun sequence data from
Brassica oleracea
and
Oryza sativa
genome sequence for their ability to add to the annotation of
Arabidopsis thaliana
Manpreet S. Katari
,
Vivekanand Balija
,
Richard K. Wilson
,
Robert A. Martienssen
,
and
W. Richard McCombie
Genome Res.
April 2005
15
:
496
-
504
;
doi:
10.1101/gr.3239105
Abstract
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Comparative genome analyses of
Arabidopsis
spp.: Inferring chromosomal rearrangement events in the evolutionary history of
A. thaliana
Krithika Yogeeswaran
,
Amy Frary
,
Thomas L. York
,
Alison Amenta
,
Andrew H. Lesser
,
June B. Nasrallah
,
Steven D. Tanksley
,
and
Mikhail E. Nasrallah
Genome Res.
April 2005
15
:
505
-
515
;
doi:
10.1101/gr.3436305
Abstract
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Chromosome triplication found across the tribe
Brassiceae
Martin A. Lysak
,
Marcus A. Koch
,
Ales Pecinka
,
and
Ingo Schubert
Genome Res.
April 2005
15
:
516
-
525
;
Published in Advance
March 21, 2005
,
doi:
10.1101/gr.3531105
Abstract
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Ancient haplotypes resulting from extensive molecular rearrangements in the wheat A genome have been maintained in species of three different ploidy levels
Edwige Isidore
,
Beatrice Scherrer
,
Boulos Chalhoub
,
Catherine Feuillet
,
and
Beat Keller
Genome Res.
April 2005
15
:
526
-
536
;
doi:
10.1101/gr.3131005
Abstract
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Functional insights from the distribution and role of homopeptide repeat-containing proteins
Noel G. Faux
,
Stephen P. Bottomley
,
Arthur M. Lesk
,
James A. Irving
,
John R. Morrison
,
Maria Garcia de la Banda
,
and
James C. Whisstock
Genome Res.
April 2005
15
:
537
-
551
;
doi:
10.1101/gr.3096505
Abstract
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Novel specificities emerge by stepwise duplication of functional modules
José B. Pereira-Leal
and
Sarah A. Teichmann
Genome Res.
April 2005
15
:
552
-
559
;
doi:
10.1101/gr.3102105
Abstract
Full Text
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Methods
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Forcing interactions as a genetic screen to identify proteins that exert a defined activity
Michael DeVit
,
Paul J. Cullen
,
Margaret Branson
,
George F. Sprague, Jr.
,
and
Stanley Fields
Genome Res.
April 2005
15
:
560
-
565
;
doi:
10.1101/gr.3259905
Abstract
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ECgene: Genome-based EST clustering and gene modeling for alternative splicing
Namshin Kim
,
Seokmin Shin
,
and
Sanghyuk Lee
Genome Res.
April 2005
15
:
566
-
576
;
doi:
10.1101/gr.3030405
Abstract
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RESOURCES
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Closing in on the
C. elegans
ORFeome by cloning TWINSCAN predictions
Chaochun Wei
,
Philippe Lamesch
,
Manimozhiyan Arumugam
,
Jennifer Rosenberg
,
Ping Hu
,
Marc Vidal
,
and
Michael R. Brent
Genome Res.
April 2005
15
:
577
-
582
;
doi:
10.1101/gr.3329005
Abstract
Full Text
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Construction of a mini-Tn
5-luxCDABE
mutant library in
Pseudomonas aeruginosa
PAO1: A tool for identifying differentially regulated genes
Shawn Lewenza
,
Reza K. Falsafi
,
Geoff Winsor
,
W. James Gooderham
,
Joseph B. McPhee
,
Fiona S.L. Brinkman
,
and
Robert E.W. Hancock
Genome Res.
April 2005
15
:
583
-
589
;
doi:
10.1101/gr.3513905
Abstract
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CADLIVE dynamic simulator: Direct link of biochemical networks to dynamic models
Hiroyuki Kurata
,
Kouichi Masaki
,
Yoshiyuki Sumida
,
and
Rei Iwasaki
Genome Res.
April 2005
15
:
590
-
600
;
doi:
10.1101/gr.3463705
Abstract
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ERRATA
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Correction for Volume 15, p. 231
Janet M. Young
,
Marijo Kambere
,
Barbara J. Trask
,
and
Robert P. Lane
Genome Res.
April 2005
15
:
601
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Correction for Volume 15, p. 376
Genome Res.
April 2005
15
:
601
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April 2005;
15
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