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LETTERS

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  Millions of Years of Evolution Preserved: A Comprehensive Catalog of the Processed Pseudogenes in the Human Genome

  • Zhaolei Zhang,
  • Paul M. Harrison,
  • Yin Liu,
  • and Mark Gerstein

  Genome Res. December 2003 13: 2541-2558; doi:10.1101/gr.1429003
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  A Genome-Wide Survey of Human Pseudogenes

  • David Torrents,
  • Mikita Suyama,
  • Evgeny Zdobnov,
  • and Peer Bork

  Genome Res. December 2003 13: 2559-2567; doi:10.1101/gr.1455503
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  From Gene Networks to Gene Function

  • Thomas Schlitt,
  • Kimmo Palin,
  • Johan Rung,
  • Sabine Dietmann,
  • Michael Lappe,
  • Esko Ukkonen,
  • and Alvis Brazma

  Genome Res. December 2003 13: 2568-2576; doi:10.1101/gr.1111403
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  Comparative Genome Analysis of Vibrio vulnificus, a Marine Pathogen

  • Chung-Yung Chen,
  • Keh-Ming Wu,
  • Yo-Cheng Chang,
  • Chuan-Hsiung Chang,
  • Hui-Chi Tsai,
  • Tsai-Lien Liao,
  • Yen-Ming Liu,
  • Hsiang-Ju Chen,
  • Arthur Bo-Ting Shen,
  • Jian-Chiuan Li,
  • Teh-Li Su,
  • Chung-Ping Shao,
  • Chung-Te Lee,
  • Lien-I Hor,
  • and Shih-Feng Tsai

  Genome Res. December 2003 13: 2577-2587; doi:10.1101/gr.1295503
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  Genomic Analysis in the sting-2 Quantitative Trait Locus for Defensive Behavior in the Honey Bee, Apis mellifera

  • Neil F. Lobo,
  • Lucas Q. Ton,
  • Catherine A. Hill,
  • Christine Emore,
  • Jeanne Romero-Severson,
  • Greg J. Hunt,
  • and Frank H. Collins

  Genome Res. December 2003 13: 2588-2593; doi:10.1101/gr.1634503
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  Nucleotide Frequency Variation Across Human Genes

  • Elizabeth Louie,
  • Jurg Ott,
  • and Jacek Majewski

  Genome Res. December 2003 13: 2594-2601; Published in Advance January 1, 2003, doi:10.1101/gr.1317703
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  Gene Length and Proximity to Neighbors Affect Genome-Wide Expression Levels

  • Francesca Chiaromonte,
  • Webb Miller,
  • and Eric E. Bouhassira,

  Genome Res. December 2003 13: 2602-2608; Published in Advance January 1, 2003, doi:10.1101/gr.1169203
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  Characterizing Embryonic Gene Expression Patterns in the Mouse Using Nonredundant Sequence-Based Selection

  • Rita Sousa-Nunes,
  • Amer Ahmed Rana,
  • Ross Kettleborough,
  • Joshua M. Brickman,
  • Melanie Clements,
  • Alistair Forrest,
  • Sean Grimmond,
  • Philip Avner,
  • James C. Smith,
  • Sally L. Dunwoodie,
  • and Rosa S.P. Beddington

  Genome Res. December 2003 13: 2609-2620; Published in Advance January 1, 2003, doi:10.1101/gr.1362303
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  Analysis of the Gene-Dense Major Histocompatibility Complex Class III Region and Its Comparison to Mouse

  • Tao Xie,
  • Lee Rowen,
  • Begoña Aguado,
  • Mary Ellen Ahearn,
  • Anup Madan,
  • Shizhen Qin,
  • R. Duncan Campbell,
  • and Leroy Hood

  Genome Res. December 2003 13: 2621-2636; doi:10.1101/gr.1736803
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  Sequence Information for the Splicing of Human Pre-mRNA Identified by Support Vector Machine Classification

  • Xiang H-F. Zhang,
  • Katherine A. Heller,
  • Ilana Hefter,
  • Christina S. Leslie,
  • and Lawrence A. Chasin

  Genome Res. December 2003 13: 2637-2650; doi:10.1101/gr.1679003
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  Molecular Correlates of Genes Exhibiting RNAi Phenotypes in Caenorhabditis elegans

  • Asher D. Cutter,
  • Bret A. Payseur,
  • Tovah Salcedo,
  • Anne M. Estes,
  • Jeffrey M. Good,
  • Elizabeth Wood,
  • Thomas Hartl,
  • Heather Maughan,
  • Jannine Strempel,
  • Baomin Wang,
  • Anthony C. Bryan,
  • and Melissa Dellos

  Genome Res. December 2003 13: 2651-2657; doi:10.1101/gr.1659203
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  Genes and Transposons Are Differentially Methylated in Plants, but Not in Mammals

  • Pablo D. Rabinowicz,
  • Lance E. Palmer,
  • Bruce P. May,
  • Michael T. Hemann,
  • Scott W. Lowe,
  • W. Richard McCombie,
  • and Robert A. Martienssen

  Genome Res. December 2003 13: 2658-2664; doi:10.1101/gr.1784803
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  Hierarchy of Sequence-Dependent Features Associated With Prokaryotic Translation

  • Gila Lithwick and
  • Hanah Margalit

  Genome Res. December 2003 13: 2665-2673; doi:10.1101/gr.1485203
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  The Clustered Olfactory Receptor Gene Family 262: Genomic Organization, Promotor Elements, and Interacting Transcription Factors

  • Reiner Hoppe,
  • Henning Frank,
  • Heinz Breer,
  • and Jörg Strotmann

  Genome Res. December 2003 13: 2674-2685; doi:10.1101/gr.1372203
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  Correlations Between Gene Expression and Gene Conservation in Fission Yeast

  • Juan Mata and
  • Jürg Bähler

  Genome Res. December 2003 13: 2686-2690; Published in Advance January 1, 2003, doi:10.1101/gr.1420903
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