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Table of Contents
April 2002; 12 (4)
INSIGHT/OUTLOOK
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New Twists on the Epigenetics of CpG Islands
Rolf Ohlsson
and
Chandrasekhar Kanduri
Genome Res.
April 1, 2002
12
:
525
-
526
;
doi:
10.1101/gr.18002
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Functional Diversity of Mx Proteins: Variations on a Theme of Host Resistance to Infection
Seung-Hwan Lee
and
Silvia M. Vidal
Genome Res.
April 1, 2002
12
:
527
-
530
;
doi:
10.1101/gr.20102
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ARTICLES
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The Genome of
M. acetivorans
Reveals Extensive Metabolic and Physiological Diversity
James E. Galagan
,
Chad Nusbaum
,
Alice Roy
,
Matthew G. Endrizzi
,
Pendexter Macdonald
,
Will FitzHugh
,
Sarah Calvo
,
Reinhard Engels
,
Serge Smirnov
,
Deven Atnoor
,
Adam Brown
,
Nicole Allen
,
Jerome Naylor
,
Nicole Stange-Thomann
,
Kurt DeArellano
,
Robin Johnson
,
Lauren Linton
,
Paul McEwan
,
Kevin McKernan
,
Jessica Talamas
,
Andrea Tirrell
,
Wenjuan Ye
,
Andrew Zimmer
,
Robert D. Barber
,
Isaac Cann
,
David E. Graham
,
David A. Grahame
,
Adam M. Guss
,
Reiner Hedderich
,
Cheryl Ingram-Smith
,
H. Craig Kuettner
,
Joseph A. Krzycki
,
John A. Leigh
,
Weixi Li
,
Jinfeng Liu
,
Biswarup Mukhopadhyay
,
John N. Reeve
,
Kerry Smith
,
Timothy A. Springer
,
Lowell A. Umayam
,
Owen White
,
Robert H. White
,
Everly Conway de Macario
,
James G. Ferry
,
Ken F. Jarrell
,
Hua Jing
,
Alberto J.L. Macario
,
Ian Paulsen
,
Matthew Pritchett
,
Kevin R. Sowers
,
Ronald V. Swanson
,
Steven H. Zinder
,
Eric Lander
,
William W. Metcalf
,
and
Bruce Birren
Genome Res.
April 1, 2002
12
:
532
-
542
;
doi:
10.1101/gr.223902
Abstract
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A Genome-Wide Screen for Normally Methylated Human CpG Islands That Can Identify Novel Imprinted Genes
Liora Z. Strichman-Almashanu
,
Richard S. Lee
,
Patrick O. Onyango
,
Elizabeth Perlman
,
Folke Flam
,
Matthew B. Frieman
,
and
Andrew P. Feinberg
Genome Res.
April 1, 2002
12
:
543
-
554
;
Published in Advance
March 20, 2002
,
doi:
10.1101/gr.224102
Abstract
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LETTERS
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Annotated Expressed Sequence Tags and cDNA Microarrays for Studies of Brain and Behavior in the Honey Bee
Charles W. Whitfield
,
Mark R. Band
,
Maria F. Bonaldo
,
Charu G. Kumar
,
Lei Liu
,
Jose R. Pardinas
,
Hugh M. Robertson
,
M. Bento Soares
,
and
Gene E. Robinson
Genome Res.
April 1, 2002
12
:
555
-
566
;
doi:
10.1101/gr.5302
Abstract
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Comparative Analysis of Chloroplast Genomes: Functional Annotation, Genome-Based Phylogeny, and Deduced Evolutionary Patterns
Javier De Las Rivas
,
Juan Jose Lozano
,
and
Angel R. Ortiz
Genome Res.
April 1, 2002
12
:
567
-
583
;
doi:
10.1101/gr.209402
Abstract
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Functional Genomics on
Potato Virus A
: Virus Genome-Wide Map of Sites Essential for Virus Propagation
Tuija Kekarainen
,
Harri Savilahti
,
and
Jari P.T. Valkonen
Genome Res.
April 1, 2002
12
:
584
-
594
;
Published in Advance
March 20, 2002
,
doi:
10.1101/gr.220702
Abstract
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Polymorphisms and the Differential Antiviral Activity of the Chicken
Mx
Gene
Jae-Hong Ko
,
Hee-Kyung Jin
,
Atsushi Asano
,
Ayato Takada
,
Ai Ninomiya
,
Hiroshi Kida
,
Hironao Hokiyama
,
Mutsuo Ohara
,
Masaoki Tsuzuki
,
Masahide Nishibori
,
Makoto Mizutani
,
and
Tomomasa Watanabe
Genome Res.
April 1, 2002
12
:
595
-
601
;
Published in Advance
March 20, 2002
,
doi:
10.1101/gr.210702
Abstract
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Patterns of Human Diversity, within and among Continents, Inferred from Biallelic DNA Polymorphisms
Chiara Romualdi
,
David Balding
,
Ivane S. Nasidze
,
Gregory Risch
,
Myles Robichaux
,
Stephen T. Sherry
,
Mark Stoneking
,
Mark A. Batzer
,
and
Guido Barbujani
Genome Res.
April 1, 2002
12
:
602
-
612
;
doi:
10.1101/gr.214902
Abstract
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Vestibular Dysfunction in the
Epistatic circler
Mouse Is Caused by Phenotypic Interaction of One Recessive Gene and Three Modifier Genes
Kim Cryns
,
Michiel P. Van Spaendonck
,
Kris Flothmann
,
Arjan M. van Alphen
,
Paul H. Van De Heyning
,
Jean-Pierre Timmermans
,
Chris I. De Zeeuw
,
and
Guy Van Camp
Genome Res.
April 1, 2002
12
:
613
-
617
;
Published in Advance
March 20, 2002
,
doi:
10.1101/gr.218402
Abstract
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A Quantitative Trait Locus Influencing Anxiety in the Laboratory Rat
Alberto Fernández-Teruel
,
Rosa M. Escorihuela
,
Jeffrey A. Gray
,
Raúl Aguilar
,
Luis Gil
,
Lydia Giménez-Llort
,
Adolf Tobeña
,
Amarjit Bhomra
,
Alison Nicod
,
Richard Mott
,
Peter Driscoll
,
Gerard R. Dawson
,
and
Jonathan Flint
Genome Res.
April 1, 2002
12
:
618
-
626
;
Published in Advance
March 20, 2002
,
doi:
10.1101/gr.203402
Abstract
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Complex SNP-Based Haplotypes in Three Human Helicases: Implications for Cancer Association Studies
Dimitra Trikka
,
Zhe Fang
,
Alex Renwick
,
Sally H. Jones
,
Ranajit Chakraborty
,
Marek Kimmel
,
and
David L. Nelson
Genome Res.
April 1, 2002
12
:
627
-
639
;
doi:
10.1101/gr.176702
Abstract
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Supplemental Research Data
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Engineering a Reduced
Escherichia coli
Genome
Vitaliy Kolisnychenko
,
Guy Plunkett III
,
Christopher D. Herring
,
Tamás Fehér
,
János Pósfai
,
Frederick R. Blattner
,
and
György Pósfai
Genome Res.
April 1, 2002
12
:
640
-
647
;
doi:
10.1101/gr.217202
Abstract
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METHODS
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Predicting Gene Ontology Functions from ProDom and CDD Protein Domains
Jonathan Schug
,
Sharon Diskin
,
Joan Mazzarelli
,
Brian P. Brunk
,
and
Christian J. Stoeckert, Jr.
Genome Res.
April 1, 2002
12
:
648
-
655
;
doi:
10.1101/gr.222902
Abstract
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Supplemental Research Data
RESOURCE
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BLAT
—The
BLAST
-Like Alignment Tool
W. James Kent
Genome Res.
April 1, 2002
12
:
656
-
664
;
Published in Advance
March 20, 2002
,
doi:
10.1101/gr.229202
Abstract
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April 2002;
12
(4)
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