Volume 12, Issue 11 | November 2002

ARTICLE
- - Structural Characterization of the Human Proteome
    Arne Müller
    Robert M. MacCallum
    Michael J.E. Sternberg
    First Published November 1, 2002
LETTERS
- - Signatures of Domain Shuffling in the Human Genome
    Henrik Kaessmann
    Sebastian Zöllner
    Anton Nekrutenko
    Wen-Hsiung Li
    First Published November 1, 2002
  - Genomic Structure and Evolution of the Ancestral Chromosome Fusion Site in 2q13–2q14.1 and Paralogous Regions on Other Human Chromosomes
    Yuxin Fan
    Elena Linardopoulou
    Cynthia Friedman
    Eleanor Williams
    Barbara J. Trask
    First Published November 1, 2002
  - Gene Content and Function of the Ancestral Chromosome Fusion Site in Human Chromosome 2q13–2q14.1 and Paralogous Regions
    Yuxin Fan
    Tera Newman
    Elena Linardopoulou
    Barbara J. Trask
    First Published November 1, 2002
  - Segmental Polymorphisms in the Proterminal Regions of a Subset of Human Chromosomes
    Hera Der-Sarkissian
    Gilles Vergnaud
    Yves-Marie Borde
    Gilles Thomas
    José-Arturo Londoño-Vallejo
    First Published November 1, 2002
  - Neighboring-Nucleotide Effects on Single Nucleotide Polymorphisms: A Study of 2.6 Million Polymorphisms Across the Human Genome
    Zhongming Zhao
    Eric Boerwinkle
    First Published November 1, 2002
  - In Silico Model-Driven Assessment of the Effects of Single Nucleotide Polymorphisms (SNPs) on Human Red Blood Cell Metabolism
    Neema Jamshidi
    Sharon J. Wiback
    Bernhard Ø. Palsson
    First Published November 1, 2002
  - Identification of Candidate Genes Regulating HDL Cholesterol Using a Chromosomal Region Expression Array
    Laura A. Cox
    Shifra Birnbaum
    John L. VandeBerg
    First Published October 15, 2002
  - Systematic Learning of Gene Functional Classes From DNA Array Expression Data by Using Multilayer Perceptrons
    Alvaro Mateos
    Joaquı́n Dopazo
    Ronald Jansen
    Yuhai Tu
    Mark Gerstein
    First Published November 1, 2002
  - Novel PAX6 Binding Sites in the Human Genome and the Role of Repetitive Elements in the Evolution of Gene Regulation
    Yi-Hong Zhou
    Jessica B. Zheng
    Xun Gu
    Grady F. Saunders
    W.-K. Alfred Yung
    First Published November 1, 2002
  - Genome-wide Co-occurrence of Promoter Elements Reveals a cis-Regulatory Cassette of rRNA Transcription Motifs in Saccharomyces cerevisiae
    Priya Sudarsanam
    Yitzhak Pilpel
    George M. Church
    First Published November 1, 2002
  - Genome Dynamics in Aging Mice
    Martijn E.T. Dollé
    Jan Vijg
    First Published November 1, 2002
  - Identification of New Herpesvirus Gene Homologs in the Human Genome
    Ria Holzerlandt
    Christine Orengo
    Paul Kellam
    M. Mar Albà
    First Published October 15, 2002
METHODS
- - Gene Expression Analysis Using Oligonucleotide Arrays Produced by Maskless Photolithography
    Emile F. Nuwaysir
    Wei Huang
    Thomas J. Albert
    Jaz Singh
    Kate Nuwaysir
    Alan Pitas Todd Richmond Tom Gorski James P. Berg Jeff Ballin Mark McCormick Jason Norton Tim Pollock Terry Sumwalt Lawrence Butcher DeAnn Porter Michael Molla Christine Hall Fred Blattner
    ...[+14 authors]...,
    Michael R. Sussman
    Rodney L. Wallace
    Franco Cerrina
    Roland D. Green
    First Published November 1, 2002
  - Genomic Signature Tags (GSTs): A System for Profiling Genomic DNA
    John J. Dunn
    Sean R. McCorkle
    Laura A. Praissman
    Geoffrey Hind
    Daniel van der Lelie
    First Published November 1, 2002
  - SNPSTRs: Empirically Derived, Rapidly Typed, Autosomal Haplotypes for Inference of Population History and Mutational Processes
    Joanna L. Mountain
    Alec Knight
    Matthew Jobin
    Christopher Gignoux
    Adam Miller
    First Published November 1, 2002
  - Protein–Protein Interactions Between Large Proteins: Two-Hybrid Screening Using a Functionally Classified Library Composed of Long cDNAs
    Manabu Nakayama
    Reiko Kikuno
    Osamu Ohara
    First Published October 15, 2002
  - Detection of Peptides, Proteins, and Drugs That Selectively Interact With Protein Targets
    Ilya G. Serebriiskii
    Olga Mitina
    Elena N. Pugacheva
    Elizaveta Benevolenskaya
    Elena Kotova
    Garabet G. Toby
    ...[+1 authors]...,
    Vladimir Khazak
    William G. Kaelin
    Jonathan Chernoff
    Erica A. Golemis
    First Published November 1, 2002
  - The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and Rice
    Klaas Vandepoele
    Yvan Saeys
    Cedric Simillion
    Jeroen Raes
    Yves Van de Peer
    First Published November 1, 2002
ERRATUM
- - Erratum for vol. 12, p. 1015
    First Published November 1, 2002

Table of Contents

Volume 12, Issue 11 | November 2002

ARTICLE

Structural Characterization of the Human Proteome

LETTERS

Signatures of Domain Shuffling in the Human Genome

Genomic Structure and Evolution of the Ancestral Chromosome Fusion Site in 2q13–2q14.1 and Paralogous Regions on Other Human Chromosomes

Gene Content and Function of the Ancestral Chromosome Fusion Site in Human Chromosome 2q13–2q14.1 and Paralogous Regions

Segmental Polymorphisms in the Proterminal Regions of a Subset of Human Chromosomes

Neighboring-Nucleotide Effects on Single Nucleotide Polymorphisms: A Study of 2.6 Million Polymorphisms Across the Human Genome

In Silico Model-Driven Assessment of the Effects of Single Nucleotide Polymorphisms (SNPs) on Human Red Blood Cell Metabolism

Identification of Candidate Genes Regulating HDL Cholesterol Using a Chromosomal Region Expression Array

Systematic Learning of Gene Functional Classes From DNA Array Expression Data by Using Multilayer Perceptrons

Novel PAX6 Binding Sites in the Human Genome and the Role of Repetitive Elements in the Evolution of Gene Regulation

Genome-wide Co-occurrence of Promoter Elements Reveals a cis-Regulatory Cassette of rRNA Transcription Motifs in Saccharomyces cerevisiae

Genome Dynamics in Aging Mice

Identification of New Herpesvirus Gene Homologs in the Human Genome

METHODS

Gene Expression Analysis Using Oligonucleotide Arrays Produced by Maskless Photolithography

Genomic Signature Tags (GSTs): A System for Profiling Genomic DNA

SNPSTRs: Empirically Derived, Rapidly Typed, Autosomal Haplotypes for Inference of Population History and Mutational Processes

Protein–Protein Interactions Between Large Proteins: Two-Hybrid Screening Using a Functionally Classified Library Composed of Long cDNAs

Detection of Peptides, Proteins, and Drugs That Selectively Interact With Protein Targets

The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and Rice

ERRATUM

Erratum for vol. 12, p. 1015

Table of Contents

Volume 12, Issue 11 | November 2002

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ARTICLE

LETTERS

METHODS

ERRATUM