Volume 12, Issue 12 | December 2002

LETTERS
- - Interrogating a High-Density SNP Map for Signatures of Natural Selection
    Joshua M. Akey
    Ge Zhang
    Kun Zhang
    Li Jin
    Mark D. Shriver
    First Published December 1, 2002
  - Evidence for a Fast, Intrachromosomal Conversion Mechanism From Mapping of Nucleotide Variants Within a Homogeneous α-Satellite DNA Array
    Dirk Schindelhauer
    Tobias Schwarz
    First Published December 1, 2002
  - Distribution and Characterization of Regulatory Elements in the Human Genome
    Jacek Majewski
    Jurg Ott
    First Published December 1, 2002
  - Selecting for Functional Alternative Splices in ESTs
    Zhengyan Kan
    David States
    Warren Gish
    First Published December 1, 2002
  - Haplotype and Linkage Disequilibrium Architecture for Human Cancer-Associated Genes
    Penelope E. Bonnen
    Peggy J. Wang
    Marek Kimmel
    Ranajit Chakraborty
    David L. Nelson
    First Published November 12, 2002
  - Retroposed New Genes Out of the X in Drosophila
    Esther Betrán
    Kevin Thornton
    Manyuan Long
    First Published November 12, 2002
  - Domain Regulation of Imprinting Cluster in Kip2/Lit1 Subdomain on Mouse Chromosome 7F4/F5: Large-Scale DNA Methylation Analysis Reveals That DMR-Lit1 Is a Putative Imprinting Control Region
    Hitomi Yatsuki
    Keiichiro Joh
    Ken Higashimoto
    Hidenobu Soejima
    Yuji Arai
    Youdong Wang Izuho Hatada Yayoi Obata Hiroko Morisaki
    ...[+4 authors]...,
    Zhongming Zhang
    Tetsuji Nakagawachi
    Yuji Satoh
    Tsunehiro Mukai
    First Published December 1, 2002
  - Diversity in Nucleotide Binding Site–Leucine-Rich Repeat Genes in Cereals
    Jianfa Bai
    Lourdes A. Pennill
    Jianchang Ning
    Se Weon Lee
    Jegadeesan Ramalingam
    Craig A. Webb Bingyu Zhao
    ...[+2 authors]...,
    Qing Sun
    James C. Nelson
    Jan E. Leach
    Scot H. Hulbert
    First Published December 1, 2002
  - A Nonsense Mutation in the FMO3 Gene Underlies Fishy Off-Flavor in Cow's Milk
    Anne Lundén
    Stefan Marklund
    Victoria Gustafsson
    Leif Andersson
    First Published November 12, 2002
  - Extreme Pathway Lengths and Reaction Participation in Genome-Scale Metabolic Networks
    Jason A. Papin
    Nathan D. Price
    Bernhard Ø. Palsson
    First Published December 1, 2002
  - Large Functional Range of Steady-State Levels of Nuclear and Mitochondrial Transcripts Coding for the Subunits of the Human Mitochondrial OXPHOS System
    Hervé Duborjal
    Réjane Beugnot
    Bénédicte Mousson de Camaret
    Jean-Paul Issartel
    First Published December 1, 2002
  - The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications
    Dan Larhammar
    Lars-Gustav Lundin
    Finn Hallböök
    First Published December 1, 2002
  - Gene Expression Profiling of Embryo-Derived Stem Cells Reveals Candidate Genes Associated With Pluripotency and Lineage Specificity
    Tetsuya S. Tanaka
    Tilo Kunath
    Wendy L. Kimber
    Saied A. Jaradat
    Carole A. Stagg
    Masayuki Usuda
    ...[+1 authors]...,
    Takashi Yokota
    Hitoshi Niwa
    Janet Rossant
    Minoru S.H. Ko
    First Published December 1, 2002
METHODS
- - Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays
    Heather L. Stickney
    Jeremy Schmutz
    Ian G. Woods
    Caleb C. Holtzer
    Mark C. Dickson
    First Published December 1, 2002
  - A Novel Method for SNP Detection Using a New Duplex-Specific Nuclease From Crab Hepatopancreas
    Dmitry A. Shagin
    Denis V. Rebrikov
    Valery B. Kozhemyako
    Ilia M. Altshuler
    Alex S. Shcheglov
    Pavel A. Zhulidov
    ...[+1 authors]...,
    Ekaterina A. Bogdanova
    Dmitry B. Staroverov
    Valery A. Rasskazov
    Sergey Lukyanov
    First Published December 1, 2002
  - Generalized Gap Model for Bacterial Artificial Chromosome Clone Fingerprint Mapping and Shotgun Sequencing
    Michael C. Wendl
    Robert H. Waterston
    First Published December 1, 2002
  - A Scalable High-Throughput Chemical Synthesizer
    Eric A. Livesay
    Ying-Horng Liu
    Kevin J. Luebke
    Joel Irick
    Yuri Belosludtsev
    First Published December 1, 2002
  - A Strategy to Retrieve the Whole Set of Protein Modules in Microbial Proteomes
    Stéphanie Le Bouder-Langevin
    Isabelle Capron-Montaland
    Renaud De Rosa
    Bernard Labedan
    First Published December 1, 2002
  - A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments: A Case Study from Alfalfa
    Chang-Xing Ma
    George Casella
    Zuo-Jun Shen
    Thomas C. Osborn
    Rongling Wu
    First Published December 1, 2002
  - Extension and Integration of the Gene Ontology (GO): Combining GO Vocabularies With External Vocabularies
    David P. Hill
    Judith A. Blake
    Joel E. Richardson
    Martin Ringwald
    First Published December 1, 2002
  - Highly Efficient Modification of Bacterial Artificial Chromosomes (BACs) Using Novel Shuttle Vectors Containing the R6Kγ Origin of Replication
    Shiaoching Gong
    Xiangdong William Yang
    Chenjian Li
    Nathaniel Heintz
    First Published December 1, 2002
RESOURCE
- - Assembly, Verification, and Initial Annotation of the NIA Mouse 7.4K cDNA Clone Set
    Vincent VanBuren
    Yulan Piao
    Dawood B. Dudekula
    Yong Qian
    Mark G. Carter
    Patrick R. Martin Carole A. Stagg Uwem C. Bassey Kazuhiro Aiba Toshio Hamatani George J. Kargul
    ...[+6 authors]...,
    Amber G. Luo
    Janet Kelso
    Winston Hide
    Minoru S.H. Ko
    First Published November 12, 2002

Table of Contents

Volume 12, Issue 12 | December 2002

LETTERS

Interrogating a High-Density SNP Map for Signatures of Natural Selection

Evidence for a Fast, Intrachromosomal Conversion Mechanism From Mapping of Nucleotide Variants Within a Homogeneous α-Satellite DNA Array

Distribution and Characterization of Regulatory Elements in the Human Genome

Selecting for Functional Alternative Splices in ESTs

Haplotype and Linkage Disequilibrium Architecture for Human Cancer-Associated Genes

Retroposed New Genes Out of the X in Drosophila

Domain Regulation of Imprinting Cluster in Kip2/Lit1 Subdomain on Mouse Chromosome 7F4/F5: Large-Scale DNA Methylation Analysis Reveals That DMR-Lit1 Is a Putative Imprinting Control Region

Diversity in Nucleotide Binding Site–Leucine-Rich Repeat Genes in Cereals

A Nonsense Mutation in the FMO3 Gene Underlies Fishy Off-Flavor in Cow's Milk

Extreme Pathway Lengths and Reaction Participation in Genome-Scale Metabolic Networks

Large Functional Range of Steady-State Levels of Nuclear and Mitochondrial Transcripts Coding for the Subunits of the Human Mitochondrial OXPHOS System

The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications

Gene Expression Profiling of Embryo-Derived Stem Cells Reveals Candidate Genes Associated With Pluripotency and Lineage Specificity

METHODS

Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays

A Novel Method for SNP Detection Using a New Duplex-Specific Nuclease From Crab Hepatopancreas

Generalized Gap Model for Bacterial Artificial Chromosome Clone Fingerprint Mapping and Shotgun Sequencing

A Scalable High-Throughput Chemical Synthesizer

A Strategy to Retrieve the Whole Set of Protein Modules in Microbial Proteomes

A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments: A Case Study from Alfalfa

Extension and Integration of the Gene Ontology (GO): Combining GO Vocabularies With External Vocabularies

Highly Efficient Modification of Bacterial Artificial Chromosomes (BACs) Using Novel Shuttle Vectors Containing the R6Kγ Origin of Replication

RESOURCE

Assembly, Verification, and Initial Annotation of the NIA Mouse 7.4K cDNA Clone Set

Table of Contents

Volume 12, Issue 12 | December 2002

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LETTERS

METHODS

RESOURCE